Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
HCVKCAFX3_n01_11657chp-flag	HCVKCAFX3_n01_11657chp-flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14134279.0	0.0	151.0	37.0	57.328607713526644	151.0	pass	pass	pass	pass	warn	pass	pass	pass	warn	pass	pass
HCVKCAFX3_n01_11657in	HCVKCAFX3_n01_11657in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	19237857.0	0.0	151.0	39.0	60.172764343545936	151.0	pass	pass	pass	pass	warn	pass	pass	pass	warn	warn	pass
HCVKCAFX3_n01_11657spk-chp_flag	HCVKCAFX3_n01_11657spk-chp_flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17021793.0	0.0	151.0	38.0	55.166216682019154	151.0	pass	pass	pass	pass	warn	pass	pass	pass	warn	pass	warn
HCVKCAFX3_n01_11657spk-in	HCVKCAFX3_n01_11657spk-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	30131450.0	0.0	151.0	39.0	53.28842678996784	151.0	pass	pass	pass	pass	warn	pass	pass	pass	warn	pass	warn
HCVKCAFX3_n01_11658chp-flag	HCVKCAFX3_n01_11658chp-flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	30948448.0	0.0	151.0	39.0	44.29332565791264	151.0	pass	pass	pass	pass	warn	warn	pass	pass	fail	fail	pass
HCVKCAFX3_n01_11658in	HCVKCAFX3_n01_11658in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25612484.0	0.0	151.0	39.0	54.428569557824794	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	pass
HCVKCAFX3_n01_11658spk-chp_flag	HCVKCAFX3_n01_11658spk-chp_flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	27080322.0	0.0	151.0	39.0	48.21952790207399	151.0	pass	pass	pass	pass	warn	pass	pass	pass	fail	warn	pass
HCVKCAFX3_n01_11658spk-in	HCVKCAFX3_n01_11658spk-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20961916.0	0.0	151.0	38.0	59.247416537605545	151.0	pass	pass	pass	pass	warn	pass	pass	pass	warn	pass	warn
HCVKCAFX3_n01_undetermined	HCVKCAFX3_n01_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6319385.0	0.0	151.0	42.0	44.62567777314911	151.0	pass	pass	pass	pass	pass	fail	pass	pass	fail	pass	pass
HCVKCAFX3_n02_11657chp-flag	HCVKCAFX3_n02_11657chp-flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	14134279.0	0.0	151.0	38.0	58.75584587088893	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	pass
HCVKCAFX3_n02_11657in	HCVKCAFX3_n02_11657in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	19237857.0	0.0	151.0	39.0	61.075482390189975	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	pass
HCVKCAFX3_n02_11657spk-chp_flag	HCVKCAFX3_n02_11657spk-chp_flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	17021793.0	0.0	151.0	39.0	60.834729467895734	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	warn
HCVKCAFX3_n02_11657spk-in	HCVKCAFX3_n02_11657spk-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	30131450.0	0.0	151.0	39.0	54.554652164307086	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	warn
HCVKCAFX3_n02_11658chp-flag	HCVKCAFX3_n02_11658chp-flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	30948448.0	0.0	151.0	39.0	46.02114316530282	151.0	pass	pass	pass	pass	warn	fail	pass	pass	fail	fail	pass
HCVKCAFX3_n02_11658in	HCVKCAFX3_n02_11658in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	25612484.0	0.0	151.0	39.0	55.6698462409695	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	pass
HCVKCAFX3_n02_11658spk-chp_flag	HCVKCAFX3_n02_11658spk-chp_flag.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	27080322.0	0.0	151.0	39.0	50.53458479438585	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	pass
HCVKCAFX3_n02_11658spk-in	HCVKCAFX3_n02_11658spk-in.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	20961916.0	0.0	151.0	39.0	60.23821270583313	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	warn
HCVKCAFX3_n02_undetermined	HCVKCAFX3_n02_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6319385.0	0.0	151.0	43.0	44.36724518805353	151.0	pass	pass	pass	pass	pass	fail	pass	pass	fail	fail	pass