HCNNTADXX l02n01 dna2-frb rnh201-frb pnk.341000000088d6.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HCNNTADXX l02n01 dna2-frb rnh201-frb pnk.341000000088d6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25555064
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCCGGG	1650	0.0	8.860312	7
CCCGGGT	1950	0.0	7.612529	8
TGCCCCG	2235	0.0	6.4408393	5
GTGCCCC	2480	0.0	6.348723	4
CCGGGTA	2930	0.0	6.141041	9
GAACTCC	11980	0.0	5.895787	22
GACGTGT	4605	0.0	5.8251786	1
GCCCCGG	3085	0.0	5.686683	6
CCCTACG	2510	0.0	5.6533117	40
ACAGATC	9435	0.0	5.435407	33
TCAGACG	4810	0.0	5.3776526	3
GTCACAG	5105	0.0	5.333365	30
GTCACAC	6445	0.0	5.3119845	40
ACGTCTG	13185	0.0	5.2883983	16
ACGTGTG	4895	0.0	5.2845097	2
CGTGTGC	4725	0.0	5.2839804	3
CGTCTGA	13625	0.0	5.233319	17
CGTATGC	4270	0.0	5.0573735	45
GTCTGAA	14835	0.0	5.0340323	18