Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
HCMLCAFX5_n01_145_S2	HCMLCAFX5_n01_145_S2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3814467.0	0.0	110.0	45.0	0.6430256179959087	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_145_S3	HCMLCAFX5_n01_145_S3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4162161.0	0.0	110.0	45.0	0.6089865336780581	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_145_S4	HCMLCAFX5_n01_145_S4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4469332.0	0.0	110.0	45.0	0.590155307325569	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_145_S5	HCMLCAFX5_n01_145_S5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4519077.0	0.0	110.0	45.0	0.6704023852658408	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_145_S6	HCMLCAFX5_n01_145_S6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3299227.0	0.0	110.0	45.0	0.64806089426402	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_A1	HCMLCAFX5_n01_A1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8529156.0	0.0	110.0	49.0	28.45991966516991	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HCMLCAFX5_n01_A2	HCMLCAFX5_n01_A2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2268943.0	0.0	110.0	48.0	28.69652096536224	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HCMLCAFX5_n01_A3	HCMLCAFX5_n01_A3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15926490.0	0.0	110.0	50.0	21.53296511151911	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HCMLCAFX5_n01_A4	HCMLCAFX5_n01_A4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6742708.0	0.0	110.0	48.0	23.850315645149617	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HCMLCAFX5_n01_A5	HCMLCAFX5_n01_A5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	11821021.0	0.0	110.0	51.0	30.001674404377837	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
HCMLCAFX5_n01_A6	HCMLCAFX5_n01_A6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	11229646.0	0.0	110.0	49.0	24.62126975653968	110.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	fail
HCMLCAFX5_n01_ASD_CRISPRi	HCMLCAFX5_n01_ASD_CRISPRi.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	516137.0	0.0	110.0	46.0	9.670106967723687	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn	pass
HCMLCAFX5_n01_old_S2	HCMLCAFX5_n01_old_S2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5934039.0	0.0	110.0	45.0	0.5352677998914398	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_old_S3	HCMLCAFX5_n01_old_S3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5014134.0	0.0	110.0	45.0	0.5533956611450751	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_old_S4	HCMLCAFX5_n01_old_S4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6741547.0	0.0	110.0	45.0	0.54797511609724	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_old_S5	HCMLCAFX5_n01_old_S5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6753411.0	0.0	110.0	45.0	0.5431477515584346	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_old_S6	HCMLCAFX5_n01_old_S6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6074729.0	0.0	110.0	45.0	0.5502632298494303	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	fail	pass
HCMLCAFX5_n01_sox2_d3	HCMLCAFX5_n01_sox2_d3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	437042.0	0.0	110.0	45.0	10.29534918840752	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn	pass
HCMLCAFX5_n01_sox2_ps	HCMLCAFX5_n01_sox2_ps.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	310195.0	0.0	110.0	45.0	10.628475636293299	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn	pass
HCMLCAFX5_n01_sox2_so	HCMLCAFX5_n01_sox2_so.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	413114.0	0.0	110.0	45.0	10.624186060022172	110.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn	pass
HCMLCAFX5_n01_undetermined	HCMLCAFX5_n01_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9580542.0	0.0	110.0	46.0	17.624329969208695	110.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	warn
HCMLCAFX5_n02_145_S2	HCMLCAFX5_n02_145_S2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3814467.0	0.0	40.0	49.0	1.4473581761226404	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_145_S3	HCMLCAFX5_n02_145_S3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4162161.0	0.0	40.0	50.0	1.5174569172119963	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_145_S4	HCMLCAFX5_n02_145_S4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4469332.0	0.0	40.0	50.0	1.4544902907190604	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_145_S5	HCMLCAFX5_n02_145_S5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	4519077.0	0.0	40.0	50.0	1.741638834655838	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_145_S6	HCMLCAFX5_n02_145_S6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3299227.0	0.0	40.0	50.0	1.4203327021753884	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_A1	HCMLCAFX5_n02_A1.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8529156.0	0.0	40.0	51.0	29.09614367873361	40.0	pass	pass	pass	pass	fail	pass	pass	pass	fail	warn	pass
HCMLCAFX5_n02_A2	HCMLCAFX5_n02_A2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2268943.0	0.0	40.0	50.0	28.739212837100393	40.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	pass
HCMLCAFX5_n02_A3	HCMLCAFX5_n02_A3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15926490.0	0.0	40.0	51.0	22.318498697333343	40.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	pass
HCMLCAFX5_n02_A4	HCMLCAFX5_n02_A4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6742708.0	0.0	40.0	49.0	23.953793550418705	40.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	pass
HCMLCAFX5_n02_A5	HCMLCAFX5_n02_A5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	11821021.0	0.0	40.0	53.0	30.468771871427613	40.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	pass
HCMLCAFX5_n02_A6	HCMLCAFX5_n02_A6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	11229646.0	0.0	40.0	50.0	24.131049202076408	40.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	pass
HCMLCAFX5_n02_ASD_CRISPRi	HCMLCAFX5_n02_ASD_CRISPRi.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	516137.0	0.0	40.0	47.0	1.710204848712648	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_old_S2	HCMLCAFX5_n02_old_S2.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5934039.0	0.0	40.0	49.0	0.791231739461099	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_old_S3	HCMLCAFX5_n02_old_S3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5014134.0	0.0	40.0	49.0	0.984536911059816	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_old_S4	HCMLCAFX5_n02_old_S4.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6741547.0	0.0	40.0	52.0	0.9471861577172124	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_old_S5	HCMLCAFX5_n02_old_S5.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6753411.0	0.0	40.0	52.0	1.036839013648066	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_old_S6	HCMLCAFX5_n02_old_S6.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6074729.0	0.0	40.0	49.0	0.9673517946232663	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_sox2_d3	HCMLCAFX5_n02_sox2_d3.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	437042.0	0.0	40.0	45.0	1.250909523569817	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_sox2_ps	HCMLCAFX5_n02_sox2_ps.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	310195.0	0.0	40.0	45.0	1.5261367849256113	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_sox2_so	HCMLCAFX5_n02_sox2_so.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	413114.0	0.0	40.0	47.0	1.7232531456208213	40.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	pass
HCMLCAFX5_n02_undetermined	HCMLCAFX5_n02_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9580542.0	0.0	40.0	48.0	27.132778720645156	40.0	pass	pass	pass	pass	warn	fail	pass	pass	fail	fail	pass