FastQCFastQC Report
Tue 7 Dec 2021
HCLMMAFX3_n02_11658spk-in-Flag.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHCLMMAFX3_n02_11658spk-in-Flag.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13195932
Sequences flagged as poor quality0
Sequence length151
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG200000.1515618601247718No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)