FastQCFastQC Report
Thu 12 May 2022
HCKHVDRX2_n02_HTO_B_220508.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHCKHVDRX2_n02_HTO_B_220508.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65728936
Sequences flagged as poor quality0
Sequence length104
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7457171.1345338071500197No Hit
AGCTTACTATCCCCCATATAAGAAAAGAGAACTCTCCCCGGGGCTCCCGC765360.11644186663846193No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)