HCG37BGXB_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HCG37BGXB_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26070794
Sequences flagged as poor quality	0
Sequence length	50
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1043689	4.003288123867651	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	280157	1.07460095001326	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	50830	0.19496912905682887	No Hit
GCATAGCTCTTAAACCCGTGTAGCGCAGCTGCTTCCCCCATATAAGAAAA	44245	0.16971098003382637	No Hit
GCATAGCTCTTAAACCCGTGTAGCGCAGCTGCTTCCCCCATATAAGAAAC	43974	0.1686715026784378	No Hit
GCATAGCTCTTAAACCCGTGTAGCGCAGCTGCTTCCCCCATATAAGAAAT	38694	0.148418954942454	No Hit
GCATAGCTCTTAAACCCTTTCTGATATCCAGTTTACCCCATATAAGAAAA	37264	0.14293388993062506	No Hit
GCATAGCTCTTAAACCCTTTCTGATATCCAGTTTACCCCATATAAGAAAC	37068	0.14218209081012262	No Hit
GCATAGCTCTTAAACCCGTGTAGCGCAGCTGCTTCCCCCATATAAGAAAG	33540	0.1286497066410789	No Hit
GCATAGCTCTTAAACCCTTTCTGATATCCAGTTTACCCCATATAAGAAAT	32993	0.12655157338130937	No Hit
GCATAGCTCTTAAACCCTTTCTGATATCCAGTTTACCCCATATAAGAAAG	28504	0.10933307209592465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCATAGC	135820	43.597294	1
ATAGCTC	136870	43.412533	3
CATAGCT	136425	43.339565	2
TAGCTCT	136765	43.214546	4
GTCCGAC	36660	42.70231	14
TAATGCG	25925	42.56405	5
TGTCCGA	36775	42.533276	13
CGACAAT	37760	42.509228	17
TTGTCCG	36970	42.243862	12
CCGACAA	38175	42.17984	16
AGTTGTA	55175	42.175766	7
GTTGTAC	54605	42.09053	8
TCCGACA	37630	42.013527	15
TTGTACC	53915	42.00911	9
ACCCGTG	22780	41.924313	14
TCACCTA	30540	41.90913	9
CAGTCGA	19810	41.644886	3
AGTCGAT	19850	41.61025	4
AACGCTT	25980	41.504105	13
TAGCGCA	22875	41.451656	21