HCG37BGXB_n02_3HTO.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HCG37BGXB_n02_3HTO.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4993975
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	55846	1.1182675123523846	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGATAA	260945	43.929188	1
CGATAAT	261120	43.867844	2
AGGACCA	101380	43.758434	1
GGACCAT	101155	43.754017	2
TAATGCG	260550	43.74833	5
ATAATGC	261085	43.738235	4
GATAATG	262375	43.672413	3
CATCCAA	101855	43.63569	6
GCGACCC	257935	43.62981	9
TGCGACC	258465	43.62035	8
CCATCCA	101825	43.589325	5
ACCATCC	101730	43.57162	4
GACCATC	101760	43.56871	3
CGACCCA	258755	43.556175	10
ATCCAAC	102200	43.54695	7
CATGTTA	37975	43.528355	2
TCCAACC	101725	43.51151	8
ATGCGAC	260310	43.49414	7
GACCCAT	259875	43.466244	11
AATGCGA	261395	43.463005	6