HCG37BGXB_n02_1HTO.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HCG37BGXB_n02_1HTO.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5063068
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	38867	0.7676570806475441	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGATAA	327980	43.938442	1
CGATAAT	328125	43.874424	2
ATAATGC	327630	43.772472	4
TAATGCG	327205	43.762234	5
GATAATG	329015	43.74591	3
AGGACCA	81615	43.73537	1
GGACCAT	81440	43.677006	2
TGCGACC	325315	43.60373	8
CATCCAA	82005	43.599743	6
GCGACCC	324630	43.58593	9
AATGCGA	327915	43.57344	6
CATGTTA	26590	43.559963	2
CCATCCA	81965	43.55401	5
ATGCGAC	327205	43.540405	7
ACCATCC	81930	43.532864	4
CGACCCA	325285	43.522087	10
ATCCAAC	82375	43.482227	7
TCCAACC	82155	43.475895	8
GACCCAT	326375	43.468674	11
GACCATC	81990	43.46537	3