FastQCFastQC Report
Tue 7 Jun 2022
HC5HJDRX2_4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHC5HJDRX2_4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences789989673
Sequences flagged as poor quality0
Sequence length49
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG165297022.0923946938734224No Hit
CGTGGGCTCGGAGATGTGTATAAGCTGTCTCTTATACACATCTGACGCT11398980.14429277229298668No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)