FastQCFastQC Report
Tue 7 Jun 2022
HC5HJDRX2_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHC5HJDRX2_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences789989673
Sequences flagged as poor quality0
Sequence length24
%GC63

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGG98370291.2452098218757348No Hit
GGGGGGGGGTGGTCGCCGTATCAT9533160.12067448886765385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)