[2024-08-24 17:16:04,874] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2024-08-24 17:16:04,874] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2024-08-24 17:16:04,874] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-08-24 17:16:04,876] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2024-08-24 17:16:04,876] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2024-08-24 17:16:04,877] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-08-24 17:16:04,927] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2024-08-24 17:16:04,927] multiqc [INFO ] This is MultiQC v1.9 [2024-08-24 17:16:04,928] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2024-08-24 17:16:04,928] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/3f/873881ab84da3a75f2ed3d1f5f6e08/merged [2024-08-24 17:16:04,928] multiqc [INFO ] Template : default [2024-08-24 17:16:04,928] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2024-08-24 17:16:04,928] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/3f/873881ab84da3a75f2ed3d1f5f6e08/merged [2024-08-24 17:16:04,928] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2024-08-24 17:16:04,928] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-50275618/tmp_rygej4q [2024-08-24 17:16:05,037] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_7797-sp-in_fastqc.html [2024-08-24 17:16:05,040] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_7797-sp-in_fastqc.html [2024-08-24 17:16:05,089] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-input_fastqc.html [2024-08-24 17:16:05,091] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-input_fastqc.html [2024-08-24 17:16:05,135] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-08-24 17:16:05,137] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2024-08-24 17:16:05,232] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_7797-sp-red1_fastqc.html [2024-08-24 17:16:05,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_7797-sp-red1_fastqc.html [2024-08-24 17:16:05,278] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-rep-red1_fastqc.html [2024-08-24 17:16:05,280] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-rep-red1_fastqc.html [2024-08-24 17:16:05,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_undetermined_fastqc.html [2024-08-24 17:16:05,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_undetermined_fastqc.html [2024-08-24 17:16:05,372] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-sp-in_fastqc.html [2024-08-24 17:16:05,374] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-sp-in_fastqc.html [2024-08-24 17:16:05,419] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_7797-sp-red1_fastqc.html [2024-08-24 17:16:05,421] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_7797-sp-red1_fastqc.html [2024-08-24 17:16:05,467] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11689-sp-red1_fastqc.html [2024-08-24 17:16:05,469] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11689-sp-red1_fastqc.html [2024-08-24 17:16:05,514] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_undetermined_fastqc.html [2024-08-24 17:16:05,516] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_undetermined_fastqc.html [2024-08-24 17:16:05,562] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11689-sp-red1_fastqc.html [2024-08-24 17:16:05,564] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11689-sp-red1_fastqc.html [2024-08-24 17:16:05,609] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-in-red1_fastqc.html [2024-08-24 17:16:05,611] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-in-red1_fastqc.html [2024-08-24 17:16:05,655] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-rep-red1_fastqc.html [2024-08-24 17:16:05,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-rep-red1_fastqc.html [2024-08-24 17:16:05,702] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-rep-in_fastqc.html [2024-08-24 17:16:05,704] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-rep-in_fastqc.html [2024-08-24 17:16:05,752] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11689-sp-in_fastqc.html [2024-08-24 17:16:05,754] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11689-sp-in_fastqc.html [2024-08-24 17:16:05,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-input_fastqc.html [2024-08-24 17:16:05,802] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-input_fastqc.html [2024-08-24 17:16:05,849] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-in-red1_fastqc.html [2024-08-24 17:16:05,851] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-in-red1_fastqc.html [2024-08-24 17:16:05,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-sp-red1_fastqc.html [2024-08-24 17:16:05,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-sp-red1_fastqc.html [2024-08-24 17:16:05,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-sp-red1_fastqc.html [2024-08-24 17:16:05,947] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-sp-red1_fastqc.html [2024-08-24 17:16:05,993] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_7797-sp-in_fastqc.html [2024-08-24 17:16:05,995] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_7797-sp-in_fastqc.html [2024-08-24 17:16:06,044] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11689-sp-in_fastqc.html [2024-08-24 17:16:06,046] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11689-sp-in_fastqc.html [2024-08-24 17:16:06,093] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-rep-in_fastqc.html [2024-08-24 17:16:06,095] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n02_11644-rep-in_fastqc.html [2024-08-24 17:16:06,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-sp-in_fastqc.html [2024-08-24 17:16:06,143] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HC3CLAFX7_n01_11644-sp-in_fastqc.html [2024-08-24 17:16:06,649] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2024-08-24 17:16:06,651] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2024-08-24 17:16:06,659] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2024-08-24 17:16:06,665] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 11 samples (table) [2024-08-24 17:16:06,674] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2024-08-24 17:16:06,679] multiqc [DEBUG ] No samples found: conpair [2024-08-24 17:16:06,684] multiqc [DEBUG ] No samples found: peddy [2024-08-24 17:16:06,692] multiqc [DEBUG ] No samples found: somalier [2024-08-24 17:16:06,697] multiqc [DEBUG ] No samples found: methylQA [2024-08-24 17:16:06,705] multiqc [DEBUG ] No samples found: mosdepth [2024-08-24 17:16:06,709] multiqc [DEBUG ] No samples found: phantompeakqualtools [2024-08-24 17:16:06,712] multiqc [DEBUG ] No samples found: qualimap [2024-08-24 17:16:06,717] multiqc [DEBUG ] No samples found: preseq [2024-08-24 17:16:06,721] multiqc [DEBUG ] No samples found: quast [2024-08-24 17:16:06,726] multiqc [DEBUG ] No samples found: qorts [2024-08-24 17:16:06,731] multiqc [DEBUG ] No samples found: rna_seqc [2024-08-24 17:16:06,735] multiqc [DEBUG ] No samples found: rockhopper [2024-08-24 17:16:06,740] multiqc [DEBUG ] No samples found: rsem [2024-08-24 17:16:06,751] multiqc [DEBUG ] No samples found: rseqc [2024-08-24 17:16:06,755] multiqc [DEBUG ] No samples found: busco [2024-08-24 17:16:06,759] multiqc [DEBUG ] No samples found: goleft_indexcov [2024-08-24 17:16:06,763] multiqc [DEBUG ] No samples found: disambiguate [2024-08-24 17:16:06,768] multiqc [DEBUG ] No samples found: supernova [2024-08-24 17:16:06,782] multiqc [DEBUG ] No samples found: deeptools [2024-08-24 17:16:06,787] multiqc [DEBUG ] No samples found: sargasso [2024-08-24 17:16:06,791] multiqc [DEBUG ] No samples found: verifybamid [2024-08-24 17:16:06,796] multiqc [DEBUG ] No samples found: mirtrace [2024-08-24 17:16:06,800] multiqc [DEBUG ] No samples found: happy [2024-08-24 17:16:06,805] multiqc [DEBUG ] No samples found: mirtop [2024-08-24 17:16:06,811] multiqc [DEBUG ] No samples found: homer [2024-08-24 17:16:06,815] multiqc [DEBUG ] No samples found: macs2 [2024-08-24 17:16:06,819] multiqc [DEBUG ] No samples found: theta2 [2024-08-24 17:16:06,824] multiqc [DEBUG ] No samples found: snpeff [2024-08-24 17:16:06,831] multiqc [DEBUG ] No samples found: gatk [2024-08-24 17:16:06,835] multiqc [DEBUG ] No samples found: htseq [2024-08-24 17:16:06,840] multiqc [DEBUG ] No samples found: bcftools [2024-08-24 17:16:06,844] multiqc [DEBUG ] No samples found: featureCounts [2024-08-24 17:16:06,850] multiqc [DEBUG ] No samples found: fgbio [2024-08-24 17:16:06,864] multiqc [DEBUG ] No samples found: dragen [2024-08-24 17:16:06,869] multiqc [DEBUG ] No samples found: dedup [2024-08-24 17:16:06,874] multiqc [DEBUG ] No samples found: damageprofiler [2024-08-24 17:16:06,897] multiqc [DEBUG ] No samples found: biobambam2 [2024-08-24 17:16:06,902] multiqc [DEBUG ] No samples found: mtnucratio [2024-08-24 17:16:06,905] multiqc [DEBUG ] No samples found: picard [2024-08-24 17:16:06,909] multiqc [DEBUG ] No samples found: prokka [2024-08-24 17:16:06,913] multiqc [DEBUG ] No samples found: samblaster [2024-08-24 17:16:06,923] multiqc [DEBUG ] No samples found: samtools [2024-08-24 17:16:06,928] multiqc [DEBUG ] No samples found: sexdeterrmine [2024-08-24 17:16:06,933] multiqc [DEBUG ] No samples found: bamtools [2024-08-24 17:16:06,937] multiqc [DEBUG ] No samples found: jellyfish [2024-08-24 17:16:06,946] multiqc [DEBUG ] No samples found: vcftools [2024-08-24 17:16:06,950] multiqc [DEBUG ] No samples found: longranger [2024-08-24 17:16:06,955] multiqc [DEBUG ] No samples found: stacks [2024-08-24 17:16:06,960] multiqc [DEBUG ] No samples found: varscan2 [2024-08-24 17:16:07,024] multiqc [DEBUG ] No samples found: bbmap [2024-08-24 17:16:07,029] multiqc [DEBUG ] No samples found: bismark [2024-08-24 17:16:07,034] multiqc [DEBUG ] No samples found: biscuit [2024-08-24 17:16:07,038] multiqc [DEBUG ] No samples found: hicexplorer [2024-08-24 17:16:07,043] multiqc [DEBUG ] No samples found: hicup [2024-08-24 17:16:07,048] multiqc [DEBUG ] No samples found: hicpro [2024-08-24 17:16:07,052] multiqc [DEBUG ] No samples found: salmon [2024-08-24 17:16:07,057] multiqc [DEBUG ] No samples found: kallisto [2024-08-24 17:16:07,062] multiqc [DEBUG ] No samples found: slamdunk [2024-08-24 17:16:07,066] multiqc [DEBUG ] No samples found: star [2024-08-24 17:16:07,071] multiqc [DEBUG ] No samples found: hisat2 [2024-08-24 17:16:07,075] multiqc [DEBUG ] No samples found: tophat [2024-08-24 17:16:07,080] multiqc [DEBUG ] No samples found: bowtie2 [2024-08-24 17:16:07,084] multiqc [DEBUG ] No samples found: bowtie1 [2024-08-24 17:16:07,089] multiqc [DEBUG ] No samples found: snpsplit [2024-08-24 17:16:07,093] multiqc [DEBUG ] No samples found: kat [2024-08-24 17:16:07,098] multiqc [DEBUG ] No samples found: leehom [2024-08-24 17:16:07,102] multiqc [DEBUG ] No samples found: adapterRemoval [2024-08-24 17:16:07,107] multiqc [DEBUG ] No samples found: clipandmerge [2024-08-24 17:16:07,111] multiqc [DEBUG ] No samples found: cutadapt [2024-08-24 17:16:07,115] multiqc [DEBUG ] No samples found: flexbar [2024-08-24 17:16:07,120] multiqc [DEBUG ] No samples found: kaiju [2024-08-24 17:16:07,124] multiqc [DEBUG ] No samples found: kraken [2024-08-24 17:16:07,129] multiqc [DEBUG ] No samples found: malt [2024-08-24 17:16:07,133] multiqc [DEBUG ] No samples found: trimmomatic [2024-08-24 17:16:07,138] multiqc [DEBUG ] No samples found: sickle [2024-08-24 17:16:07,142] multiqc [DEBUG ] No samples found: skewer [2024-08-24 17:16:07,146] multiqc [DEBUG ] No samples found: sortmerna [2024-08-24 17:16:07,151] multiqc [DEBUG ] No samples found: biobloomtools [2024-08-24 17:16:07,155] multiqc [DEBUG ] No samples found: fastq_screen [2024-08-24 17:16:07,162] multiqc [DEBUG ] No samples found: afterqc [2024-08-24 17:16:07,170] multiqc [DEBUG ] No samples found: fastp [2024-08-24 17:16:07,659] multiqc.modules.fastqc.fastqc [INFO ] Found 22 reports [2024-08-24 17:16:07,841] multiqc [DEBUG ] No samples found: pycoqc [2024-08-24 17:16:07,877] multiqc [DEBUG ] No samples found: minionqc [2024-08-24 17:16:07,882] multiqc [DEBUG ] No samples found: multivcfanalyzer [2024-08-24 17:16:07,887] multiqc [DEBUG ] No samples found: clusterflow [2024-08-24 17:16:07,892] multiqc [DEBUG ] No samples found: bcl2fastq [2024-08-24 17:16:07,897] multiqc [DEBUG ] No samples found: interop [2024-08-24 17:16:07,901] multiqc [DEBUG ] No samples found: ivar [2024-08-24 17:16:07,906] multiqc [DEBUG ] No samples found: flash [2024-08-24 17:16:07,911] multiqc [DEBUG ] No samples found: seqyclean [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2024-08-24 17:16:07,911] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2024-08-24 17:16:07,938] multiqc [INFO ] Compressing plot data [2024-08-24 17:16:08,322] multiqc [INFO ] Report : multiqc_report.html [2024-08-24 17:16:08,322] multiqc [INFO ] Data : multiqc_data [2024-08-24 17:16:08,322] multiqc [DEBUG ] Moving data file from '/state/partition1/job-50275618/tmp_rygej4q/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/3f/873881ab84da3a75f2ed3d1f5f6e08/merged/multiqc_data' [2024-08-24 17:16:08,461] multiqc [INFO ] MultiQC complete