| Lane | Sample ID | Sample Ref | Index | Description | Control | Project | Yield (Mbases) | % PF | # Reads | % of raw clusters per lane | % Perfect Index Reads | % One Mismatch Reads (Index) | % of >= Q30 Bases (PF) | Mean Quality Score (PF) |
|---|
| 1 | Ying1i | CAGATC | N | lane1 | 436 | 100.00 | 8,558,755 | 7.42 | 98.93 | 1.07 | 98.00 | 38.00 | ||
| 1 | Ying4i | TTAGGC | N | lane1 | 462 | 100.00 | 9,054,779 | 7.85 | 98.52 | 1.48 | 97.99 | 37.99 | ||
| 1 | Ying5i | AGTCAA | N | lane1 | 447 | 100.00 | 8,765,994 | 7.60 | 98.20 | 1.80 | 98.10 | 38.04 | ||
| 1 | Ying6i | AGTTCC | N | lane1 | 467 | 100.00 | 9,162,463 | 7.95 | 98.38 | 1.62 | 98.17 | 38.08 | ||
| 1 | Ying7i | ATGTCA | N | lane1 | 487 | 100.00 | 9,553,531 | 8.28 | 98.68 | 1.32 | 98.20 | 38.10 | ||
| 1 | Ying8i | CCGTCC | N | lane1 | 459 | 100.00 | 9,005,315 | 7.81 | 98.76 | 1.24 | 98.15 | 38.07 | ||
| 1 | YingC1 | CGATGT | N | lane1 | 512 | 100.00 | 10,033,203 | 8.70 | 98.83 | 1.17 | 98.02 | 38.06 | ||
| 1 | YingC4 | GCCAAT | N | lane1 | 596 | 100.00 | 11,689,999 | 10.14 | 98.37 | 1.63 | 97.92 | 38.04 | ||
| 1 | YingC5 | ACTTGA | N | lane1 | 489 | 100.00 | 9,593,090 | 8.32 | 98.25 | 1.75 | 97.90 | 38.02 | ||
| 1 | YingC6 | GATCAG | N | lane1 | 452 | 100.00 | 8,864,338 | 7.69 | 97.77 | 2.23 | 97.89 | 37.98 | ||
| 1 | YingC7 | TAGCTT | N | lane1 | 415 | 100.00 | 8,146,160 | 7.06 | 98.67 | 1.33 | 98.01 | 38.05 | ||
| 1 | YingC8 | GGCTAC | N | lane1 | 451 | 100.00 | 8,844,939 | 7.67 | 97.94 | 2.06 | 97.82 | 37.98 | ||
| 1 | lane1 | unknown | Undetermined | Clusters with unmatched barcodes for lane 1 | N | Undetermined_indices | 206 | 100.00 | 4,039,067 | 3.50 | 0.00 | 0.00 | 97.19 | 37.80 |
| 2 | QX171-ASE-3 | Undetermined | N | lane2 | 4,030 | 100.00 | 79,012,099 | 100.00 | 0.00 | 0.00 | 89.08 | 35.48 |
| SampleID | Recipe | Operator | Directory |
|---|
| Ying1i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying1i | ||
| Ying4i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying4i | ||
| Ying5i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying5i | ||
| Ying6i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying6i | ||
| Ying7i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying7i | ||
| Ying8i | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_Ying8i | ||
| YingC1 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC1 | ||
| YingC4 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC4 | ||
| YingC5 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC5 | ||
| YingC6 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC6 | ||
| YingC7 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC7 | ||
| YingC8 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane1/Sample_YingC8 | ||
| lane1 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane1 | ||
| QX171-ASE-3 | /export/data1/gencore/demux/HAURNADXX/bcl2fastq/Unaligned/Project_lane2/Sample_QX171-ASE-3 |
bcl2fastq-1.8.4