MRP13_GTAGAG_L001_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MRP13_GTAGAG_L001_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15587768
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATCTCGTATGCC	1125837	7.2225670795203	TruSeq Adapter, Index 3 (97% over 37bp)
AGCTTCACCCTTAGAATAAGCTCATTTAGTATCTTTTCAGTCCCATACTAG	47052	0.301852067595566	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTAGAGATATCGTATGCC	30661	0.1966991040667272	TruSeq Adapter, Index 3 (97% over 37bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	127820	43.338245	11
GATCGGA	130085	43.318077	1
ACACGTC	127875	43.200024	13
CACACGT	128160	43.181156	12
ACGTCTG	127795	43.107403	15
TCGGAAG	130450	43.060432	3
AGCACAC	129085	42.995422	10
CACGTCT	128340	42.966396	14
CGGAAGA	130360	42.945778	4
GTATGCC	125685	42.88348	45
CGTCTGA	128600	42.783356	16
AGAGCAC	130130	42.76552	8
AGTCACG	127560	42.609653	28
ATCGGAA	132200	42.608894	2
GAAGAGC	131145	42.53722	6
GTCACGT	127745	42.470493	29
GAACTCC	129085	42.405582	21
CGTAGAG	127440	42.39391	33
GAGCACA	131275	42.318718	9
ACTCCAG	128890	42.30055	23