MRP12_CCGTCC_L001_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MRP12_CCGTCC_L001_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39082377
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCCGATCTCGTATG	269212	0.6888322069049178	TruSeq Adapter, Index 16 (97% over 40bp)
AGCTTCACCCTTAGAATAAGCTCATTTAGTATCTTTTCAGTCCCATACTAG	141055	0.36091714687671117	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTCCCG	35480	41.359257	35
GTCCCGA	36160	40.52604	36
CCGTCCC	36515	40.22405	34
ACCCGTC	36920	39.904663	32
CACCCGT	37115	39.707073	31
TCACCCG	37380	39.521828	30
GTCACCC	37765	39.19197	29
CCCGTCC	38040	38.777054	33
ACGTCTG	42830	38.774494	15
TCGTATG	41625	38.74903	45
CCCGATC	33990	38.6901	38
GCACACG	43565	38.218292	11
ACACGTC	43725	38.063114	13
CCCTTAG	20940	37.97324	8
CGTCTGA	44315	37.47516	16
CACGTCT	44380	37.43547	14
AGTCACC	39825	37.39057	28
CTCGTAT	39230	37.259983	44
CACACGT	44810	37.181625	12
CGATCTC	36165	36.38807	40