MRP11_ATGTCA_L001_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	MRP11_ATGTCA_L001_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8821099
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATCTCGTATG	473483	5.3676191594720795	TruSeq Adapter, Index 15 (97% over 40bp)
AGCTTCACCCTTAGAATAAGCTCATTTAGTATCTTTTCAGTCCCATACTAG	20339	0.23057217700424856	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATGTCAGAATATCGTATG	11080	0.12560793161940478	TruSeq Adapter, Index 15 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	55260	43.41112	13
GCACACG	55400	43.337948	11
GATCGGA	56685	43.14419	1
CACACGT	55620	43.13823	12
CACGTCT	55630	43.057716	14
ACGTCTG	55740	43.045357	15
TCGTATG	55065	43.03586	45
CGTCTGA	56000	42.809364	16
AGCACAC	56155	42.807327	10
TCGGAAG	57210	42.716892	3
CGGAAGA	57110	42.65934	4
GAACTCC	55920	42.451126	21
AGAGCAC	56950	42.440556	8
ACTCCAG	55805	42.36042	23
CAGTCAC	55875	42.339787	27
CTCGTAT	54705	42.26606	44
CCAGTCA	55795	42.2592	26
ATCGGAA	58060	42.18842	2
AGTCACA	56430	42.138542	28
ATGTCAG	56310	42.122845	34