FastQCFastQC Report
Wed 30 Aug 2023
H7Y7KDRX3_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7Y7KDRX3_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences919715166
Sequences flagged as poor quality0
Sequence length8
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGG20423423122.206248037449456No Hit
AGGCAGAA509502215.539782628744865No Hit
TAGCGCTC495373005.38615669625698No Hit
GTAGAGGA473578385.149185285914922No Hit
AAGAGGCA472060825.13268495998684No Hit
ATCTCAGG457167754.970753630042891No Hit
ACTCGCTA450938604.9030245087857995No Hit
TAGGCATG440201154.78627695044446No Hit
GCGTAGTA388044554.219181811339186No Hit
GGACTCCT382981794.164134768655103No Hit
GCTCATGA374018244.066674703502715No Hit
ACTGAGCG350302713.808817370311799No Hit
CTCTCTAC303248663.297201907835018No Hit
CAGAGAGG267633742.9099633222749315No Hit
CGAGGCTG255588902.779000602018995No Hit
TCCTGAGC252147902.7415868447253593No Hit
CGGAGCCT213780172.3244171446010493No Hit
GGAGCTAC164376871.7872584477964346No Hit
CGTACTAG157386641.7112541558328507No Hit
GCTACGCT109590531.1915703258067183No Hit
ATGCGCAG100957031.0976988716961094No Hit
TAAGGCGA94900761.0318494628368453No Hit
CGGGGGGG12805010.13922799659476312No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)