H7V7CAFXX_n01_vs28_170203.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7V7CAFXX_n01_vs28_170203.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8300288
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC	213253	2.5692241040310893	TruSeq Adapter, Index 6 (100% over 51bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCACACG	24930	43.58933	11
GTCACGC	24595	43.432934	29
ACACGTC	25015	43.39624	13
GATCGGA	24275	43.349007	1
AGTCACG	24820	43.211437	28
TCACGCC	24720	43.158707	30
CACACGT	25135	43.153255	12
CACGTCT	25225	43.008465	14
ACGTCTG	25185	42.96038	15
CACGCCA	24875	42.925694	31
CGTCTGA	25230	42.848347	16
GTATGCC	24760	42.788864	45
AGCACAC	25440	42.777905	10
GAGCACA	25590	42.51862	9
TATCTCG	24730	42.250187	39
CGTATGC	25085	42.162743	44
TCGGAAG	25875	42.12817	3
CAGTCAC	25465	42.09043	27
CCAGTCA	25550	41.968018	26
AGAGCAC	25990	41.926098	8