FastQCFastQC Report
Sat 1 Jul 2023
H7TV5DRX3_n01_burcu-4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7TV5DRX3_n01_burcu-4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23985449
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGAT1617760.6744755955996488No Hit
GTTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG1538820.6415639748916103No Hit
TGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCA1455170.6066886636143439No Hit
TTTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG563710.23502165833960414No Hit
GGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAG547770.2283759624428961No Hit
GTTGTTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG337870.1408645716826064No Hit
GTTGGTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG330940.13797531995336007No Hit
GGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCA298650.1245129911889496No Hit
TGTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG282960.11797152515260398No Hit
GGTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG271020.1129935070216947No Hit
GTTGATTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG257370.10730255664590643No Hit
CAACCATAAACGATGCCGACCAGGGATCAGCGGATGTTGCTTATAGGACT255610.10656877842895499No Hit
TGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCG247580.10322091531411398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)