FastQCFastQC Report
Sat 1 Jul 2023
H7TV5DRX3_n01_burcu-13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7TV5DRX3_n01_burcu-13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20384566
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCA756100.3709178797331275No Hit
GTTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG459810.2255677162810334No Hit
GGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGAT423840.20792201315446204No Hit
GGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAG267000.13098144939656797No Hit
CAACCATAAACGATGCCGACCAGGGATCAGCGGATGTTGCTTATAGGACT221640.10872932001593755No Hit
TGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTT212620.10430440363557408No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)