FastQCFastQC Report
Sat 1 Jul 2023
H7TV5DRX3_n01_June23_B3_4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7TV5DRX3_n01_June23_B3_4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17748928
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAA405870.22867296548839455No Hit
AGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGA337870.19036079249405935No Hit
CGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGA286400.16136185802320005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)