FastQCFastQC Report
Sat 1 Jul 2023
H7TV5DRX3_n01_June23_B3_12.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7TV5DRX3_n01_June23_B3_12.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18547826
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAA503300.2713525563588962No Hit
CGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGA345860.18646929295109843No Hit
AGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGA312140.16828926473647102No Hit
GCGGTGTATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACG213100.11489217119030554No Hit
TGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTGAAC202900.10939287439940401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)