FastQCFastQC Report
Sat 1 Jul 2023
H7TV5DRX3_n01_June23_B2-14.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7TV5DRX3_n01_June23_B2-14.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6682033
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGA76710.11480039083913533No Hit
CGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGA69360.1038007444740246No Hit
GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAA69000.10326198628471306No Hit
AGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGA66880.10008929916987838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)