H7TNYBGX2_n01_las14.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7TNYBGX2_n01_las14.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22508594
Sequences flagged as poor quality	0
Sequence length	76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTCCGCACATCTCGTAT	2410701	10.71013587077007	TruSeq Adapter, Index 18 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	270500	68.08009	46
GTATGCC	271160	67.91585	47
ACGTCCG	269270	67.87094	32
TCGTATG	271555	67.82583	45
GTCCGCA	267260	67.81749	34
CTCGTAT	271180	67.8127	44
CGTCCGC	267755	67.81118	33
CGCACAT	266175	67.77042	37
TATGCCG	270125	67.76698	48
TCCGCAC	266800	67.7086	35
GCCGTCT	265755	67.70403	51
ATGCCGT	270235	67.64889	49
CACGTCC	271680	67.568954	31
AGTCACG	277595	67.50717	28
GTCACGT	276510	67.4879	29
TGCCGTC	270350	67.47998	50
CCGCACA	266145	67.464584	36
TCACGTC	275410	67.32751	30
GCACATC	269095	67.28498	38
TCTCGTA	273580	67.26688	43