H7NV2AFXX_n02_qg2594.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7NV2AFXX_n02_qg2594.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	133112
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC	306	0.22988160346174652	No Hit
CTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTT	236	0.17729430855219663	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	214	0.16076687300919526	No Hit
GGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAA	199	0.14949816695714885	No Hit
GTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAA	184	0.13822946090510246	No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG	155	0.11644329587114612	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACG	30	0.0019318046	72.50226	9
GCTGCCC	55	4.0415525E-6	65.91114	145
TTAGGAC	35	0.0035592748	62.14479	8
ACTGCTT	40	0.0060386662	54.37669	8
ATACCGT	60	4.928779E-4	48.33484	6
TACCCCA	45	0.009619738	48.334835	5
CCCCACT	45	0.009619738	48.334835	7
CCTGGTG	75	2.5381094E-5	48.334835	3
CATCCCT	45	0.009619738	48.334835	5
ACCCCAC	45	0.009619738	48.334835	6
TCAATAG	70	0.0010531775	41.42986	3
CCCCTGG	90	7.4296084E-5	40.294174	1
CCCTGTG	220	0.0	39.546684	2
CCCTGGT	75	0.0014785378	38.66787	2
CCTGTGA	235	0.0	37.022427	3
GGCTTGA	80	0.002026233	36.26475	1
CTGTGAC	255	1.8189894E-12	34.11871	4
TTAAGGT	110	2.4244294E-4	32.95557	4
ACAACGT	135	2.1279082E-5	32.223225	4
CTATTTA	115	3.1399864E-4	31.53457	1