H7NV2AFXX_n01_qg2594.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7NV2AFXX_n01_qg2594.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	133112
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTT	391	0.29373760442334274	No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC	379	0.2847226395817056	No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG	326	0.244906544864475	No Hit
GGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAA	199	0.14949816695714885	No Hit
GTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAA	178	0.1337219784842839	No Hit
AATAAAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGA	143	0.10742833102950898	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCTTACG	10	0.0070843915	144.99736	1
ATTACGC	45	0.009621616	48.33246	3
AGGACAG	45	0.009621616	48.33246	5
CGTTATG	190	5.353286E-9	34.34148	1
CCCTAGA	85	0.002733737	34.117027	1
CGACCTC	85	0.002733737	34.117027	6
TAACGTT	170	7.737435E-8	34.117027	5
CCTGTGA	195	6.897608E-9	33.46093	3
TTCGACC	110	2.4251343E-4	32.95395	4
GGTCAAC	90	0.003617349	32.221638	1
GCTCTAA	90	0.003617349	32.221638	1
TCGACCT	90	0.003617349	32.221638	5
CCCTGTG	205	1.123226E-8	31.828691	2
ATAGACA	95	0.004713161	30.52576	4
AAAGTAG	95	0.004713161	30.52576	5
AAACCTA	95	0.004713161	30.52576	5
CTATTCG	95	0.004713161	30.52576	1
TGGTGAT	95	0.004713161	30.52576	5
ACGTTTC	270	1.6916601E-10	29.5365	7
ATAACGT	175	3.7429036E-6	28.999474	4