FastQCFastQC Report
Wed 18 Nov 2015
H7NJ7BCXX_l01n01_34311-1-mss.3510000003c80e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7NJ7BCXX_l01n01_34311-1-mss.3510000003c80e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8555
Sequences flagged as poor quality0
Sequence length251
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCAGA150.0048815776163.333331
CAGTGAA150.0048815776163.333334
Produced by FastQC (version 0.11.2)