H7MT5BCXX_l01n02_q_d_120.3520000003c003.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7MT5BCXX_l01n02_q_d_120.3520000003c003.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15492000
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	1242777	8.02205654531371	Illumina Single End PCR Primer 1 (100% over 51bp)
ACACTCTTTCAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCG	56992	0.36788019623031243	Illumina Single End PCR Primer 1 (100% over 41bp)
ACACTCTTTCCAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTC	54638	0.3526852569067906	Illumina Single End PCR Primer 1 (100% over 40bp)
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT	42071	0.271565969532662	Illumina Single End PCR Primer 1 (100% over 51bp)
ACACTCTTTAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGG	20311	0.13110637748515364	Illumina Single End PCR Primer 1 (100% over 42bp)
GTGACTGGAGTTCAGACGTGTGCTCTTCCAGATCGGAAGAGCGTCGTGTAG	19398	0.12521301316808675	Illumina Multiplexing PCR Primer 2.01 (96% over 29bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	146465	42.51001	45
GGTCGCC	144220	42.322445	44
GTGGTCG	143085	42.00717	42
TGGTCGC	144560	41.461803	43
GGTGGTC	145915	41.241802	41
CGGTGGT	146125	41.040985	40
ACACTCT	20035	40.46283	1
CACTCTT	20685	38.995346	2
TCGGTGG	157590	38.18945	39
CTCGGTG	157310	38.113056	38
TCTCGGT	162450	36.892612	37
GTGACTG	26350	35.281384	1
TGACTGG	27130	34.490665	2
ACTCTTT	23395	33.54574	3
CTCTTTC	21565	33.127956	4
GGCCGCC	3445	32.988358	44
GCCGCCG	4990	32.96584	45
ATCTCGG	186335	32.387836	36
CGTCGCC	3515	31.755203	44
GGCGCCG	3625	31.659895	45