H7KKVBGXH_n02_S5_R2_F10_FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7KKVBGXH_n02_S5_R2_F10_FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1944008
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CATATATACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGCCCATCT	5016	0.2580236295323887	No Hit
GTATATACATACATATATACTTACACAGTTTGAGCATTCACAGGCCACTA	4788	0.24629528273546197	No Hit
GTATAGACCTCTTAACAATATTGTTCTTCCAATCCATGAGCATGGATTGT	3149	0.16198493010316828	No Hit
GTGCAGGTACAACGGGATCCACATGCCCAGGGCTCCTGTGGCGAAGGACA	2954	0.15195410718474409	No Hit
TACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGCCCATCTGTGGCA	2485	0.12782869206299563	No Hit
GTTTATATGAGAAAGGAGGGGAATGAAAGAGAAAATAGAATCAAAACACC	2425	0.1247422850111728	No Hit
ATGTAATACCTATCAAAATACCAATAACACTTCTCACAGAACTAGAACAA	2261	0.11630610573619038	No Hit
GGGTTAATACACCAGTGTGTTTACCAATAATGAGGACACAGGGACTTTTT	2119	0.10900160904687634	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGAAA	695	0.0	121.02967	1
TGACGCG	55	0.0	118.979996	145
TTATACG	20	3.8223775E-4	109.064995	145
AAAGCCG	20	3.8223775E-4	109.064995	145
ACGGTCG	20	3.8223775E-4	109.064995	145
AGATGCG	45	1.0704753E-8	96.94666	145
CCGACGG	70	0.0	93.48428	145
GCGAAAG	980	0.0	85.06605	2
AATCCCG	30	0.0019139302	72.71	145
GAGTTAG	150	0.0	72.46683	7
CCTCTCG	65	1.3710269E-7	67.11692	145
GTATTCG	35	0.0035263707	62.322853	145
CGCTCAA	35	0.0035263707	62.322853	145
GTTAGCC	185	0.0	58.756886	9
AGTTAGC	190	0.0	57.21065	8
AACTGCG	65	1.0754458E-5	55.930763	145
GACCGTC	105	1.1150405E-9	55.212822	7
AAGGTCG	40	0.00598289	54.532497	145
AGCCGAT	135	1.9099389E-10	48.309975	6
CGAAAGC	1840	0.0	46.476875	3