H7KKVBGXH_n02_S5_R1_B04_FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7KKVBGXH_n02_S5_R1_B04_FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	127919
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGGACAGTGGGAGACAGGAAACGGCAAAAACGGCAGTGGCTGAGAC	233	0.1821465145912648	No Hit
TCTTGGAAGTGCTCTAGGAAGTGGCCCGAAGGAGGTCAGGAGTGTCCTTC	158	0.12351566225502077	No Hit
GGATAAGACTGAATGGAAACTGAACGGACAGGTGCTGGTCTTCACACTCC	157	0.12273391755720417	No Hit
GCTCTAGGAAGTGGCCCGAAGGAGGTCAGGAGTGTCCTTCATTCCCTCCC	154	0.1203886834637544	No Hit
CAATAATGCAGCAGGAACTGTTTTCTCTGGGGTTTTTTAACGGGCAAGCC	149	0.11647995997467148	No Hit
GGCTTATCCTGAGGCTCCTAACCTGCCTTCAGCCAGGAGGGGAAATACGT	131	0.1024085554139729	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATATAA	30	0.0019426971	72.39793	1
ACTATAC	50	2.0175906E-4	57.918346	3
TAATGGT	40	0.0060632275	54.319687	4
CCTACGG	40	0.0060726227	54.298443	3
ATATAAC	45	0.009673758	48.265285	3
GTACTCC	70	0.0010605091	41.370247	1
GTCTTAG	70	0.0010605091	41.370247	1
GCAGGAC	220	0.0	39.48978	3
ATTATCT	80	0.0020440773	36.198963	3
GGACAGT	185	4.1636667E-9	35.23439	6
CTATACA	105	1.8557726E-4	34.488693	4
TATAACT	90	0.003634562	32.189445	4
AGTAGAA	90	0.0036415358	32.176857	1
ATCATAC	90	0.0036415358	32.176857	3
GTAGAAA	115	3.172921E-4	31.47736	1
GACAGTG	200	3.24575E-7	28.970503	7
TTAGAGT	100	0.0060851006	28.970503	4
TAGAAAC	100	0.0060967496	28.959173	3
GAGTGAG	185	5.810065E-6	27.404528	7
AGAGTGA	165	8.420401E-5	26.336819	6