H7KKKBGXY_n02_qg2495_2016.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7KKKBGXY_n02_qg2495_2016.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	405783
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC	2090	0.5150536123987451	No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG	1550	0.38197755943447603	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	948	0.23362240409282795	No Hit
CTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTT	728	0.17940623436664424	No Hit
GTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAA	597	0.14712296966605304	No Hit
GGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAA	596	0.14687653253093402	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGTAG	40	0.0024257982	34.975834	5
GACCCGG	45	0.0042989654	31.120329	55
TTAGCGA	45	0.0043145698	31.097298	11
GTTAGCG	45	0.0043145698	31.097298	10
TATTACG	45	0.0043145698	31.097298	2
TATAGGA	80	2.471952E-6	30.611403	2
AGTCCCC	50	0.0072205886	27.987568	10
TGTGCCC	50	0.0072205886	27.987568	9
TCGGCGC	50	0.0072205886	27.987568	30
TACGGTT	50	0.007224938	27.984118	6
CTTACGG	50	0.0072336425	27.977217	4
CTATTCG	120	7.390372E-8	26.248055	1
GTACTAA	105	2.0375734E-5	23.331606	1
GGCATAA	210	8.367351E-11	21.673084	43
GGCTTAA	115	4.1016727E-5	21.310658	55
GACTAAG	85	0.0037692985	20.604506	61
CCGGTCA	85	0.0037909271	20.584171	15
CACATTA	85	0.0038017796	20.574018	31
TTACACC	85	0.0038044967	20.571482	4
GATTAAG	155	8.675197E-7	20.33362	68