FastQCFastQC Report
Tue 29 Nov 2016
H7KKKBGXY_n01_sp29_33_2016.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7KKKBGXY_n01_sp29_33_2016.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length76
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGCCATTGCATGGTTGAGTTCTGTTGACAGGTAGTTCTCTGATACCA116.666666666666664No Hit
GTGATTATCGAGCTTACTGATAAGGTTTTGAGATGTTTAATAGTACAAAT116.666666666666664No Hit
GCGCAACGTCGTGCGAGTTCTACAATTCGACTCAAATCGAAGACTGTCTC116.666666666666664No Hit
GATAAACATTGATAAACTTGATCTTGAGATGAATAGGAAACTGTACTGTA116.666666666666664No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCAAAGCCAAAGC116.666666666666664No Hit
GAAGAAAGTTCGTAACATCTCAAGGTGCTTCAGTCGCGATCTGACGTTGA116.666666666666664No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)