H7KKKBGXY_n01_qg2495_2016.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H7KKKBGXY_n01_qg2495_2016.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	405783
Sequences flagged as poor quality	0
Sequence length	76
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC	2627	0.6473903539576571	No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG	1972	0.4859740304547011	No Hit
CTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTTGACCTCTATTT	932	0.22967940993092367	No Hit
GGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAA	707	0.1742310545291449	No Hit
GTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAA	694	0.17102737177259766	No Hit
AATAAAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGAGGTCAAATAGA	437	0.10769302804701035	No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCATAGG	430	0.10596796810117724	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACGCT	45	9.1818314E-5	38.895744	38
GCTTGCG	50	1.7080054E-4	35.00185	42
GCAGCGT	60	1.2172506E-5	34.988907	1
CTTGCGT	55	2.9934655E-4	31.812017	43
TCGTTAC	45	0.00431189	31.101252	24
ACTGCTA	45	0.004317095	31.093584	8
CGCGACC	45	0.004317095	31.093584	12
CTCACGT	50	0.007198761	28.004932	28
TACGCTT	65	7.942227E-4	26.92782	39
TGTACGC	65	7.942227E-4	26.92782	37
CGCTTGC	65	7.942227E-4	26.92782	41
ACGCTTG	70	0.0012239283	25.004404	40
GCACAAC	75	0.0018251853	23.34608	56
CGACTGC	75	0.0018370087	23.320189	6
TAGGCGT	95	2.7737996E-4	22.109158	35
GTTATAA	130	4.3453856E-6	21.531635	1
AGCACAT	100	3.9425545E-4	20.988169	10
ATTACAC	100	3.9425545E-4	20.988169	3
TCGACCT	135	6.038221E-6	20.729057	5
TTAGGCG	85	0.003777331	20.596943	34