FastQCFastQC Report
Thu 22 Dec 2022
H7JYTBGXN_n02_YY266.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7JYTBGXN_n02_YY266.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATGACCCAATCGGCTCTTGAGGACGCTAGCCTGCACCTCAGCGAATCG11.8181818181818181No Hit
TTTCCTGGCTGATCATGCGTGCGATGTTTTCGACGTCATCGCGCAGGGCC11.8181818181818181No Hit
CAGAAAGGCTAAACCACGCTGTCCAGGCGTACCGTCCCACCGGAGCGCAG11.8181818181818181No Hit
TCACATAATCATCCAATACCCAAGAGAATCCTTCTCCGGGGACTAATAGA11.8181818181818181No Hit
GCCTGACAGCGAACCTCCGAAAGACAAACAGACGAGAAAGACCTTCACGC11.8181818181818181No Hit
GTGTCATACAGATTACGCCCATCGAAAATCACCGGCGCGCCCAGGCGCTG11.8181818181818181No Hit
GTAGTGGGTCGTTGATACGATATCAATACAAATCAATTCGAAATTGATGC11.8181818181818181No Hit
GATGACGGAAGCGACCATCGAAGCTAAGCCGAGTACAATCACCAATGACA11.8181818181818181No Hit
GTACTTCATGCGCAGAGGCAGACCGTGTTCAGCTCGGATGGAGTTCTCTG11.8181818181818181No Hit
GCAAATCAACAAACTCACCGAATACCAAAAACATTAAACTATCTTATCAA11.8181818181818181No Hit
AACCAAAACAACCAACCGATCGAACGACGTCATAAGACACAGATAAACCT11.8181818181818181No Hit
ATGTAATCTTCGGTCTGGGTCTTGGAGGGTTTGGTGAAGATGGTGTCAGT11.8181818181818181No Hit
AGATTCGGATACGCAGCCGATAAGTCGGTGCGTCTTCAAGCAAGTCAACG11.8181818181818181No Hit
CCTACACCATCAACTTTCCCTCTATCTCAAACAAAAAATCATTGCAAAGC11.8181818181818181No Hit
AAAATTTACATCAAAAAATAAACACAAAGAACAATATAACAGCAAATAAA11.8181818181818181No Hit
TCATCATAAAGAAATACATCAAAACAACGAACATACACAAAACAATAGAA11.8181818181818181No Hit
AAGCACTAGTACGCCGACCGGAATCACAACCAGGGTCGCAACCAGCAGCC11.8181818181818181No Hit
CAGGTGGCCTCGGCCGTCACCGAGACCCAGGCCACGGCCATGCAGTTGTC11.8181818181818181No Hit
TACAATACGAAATCGAGACGGCTGAAGTGGTGAAGCCGATACTCAAAAAA11.8181818181818181No Hit
CGCGTGGGGCGGCTGGCAGATTTTGCCGTTGACAATCCTGCTATCGTCGC11.8181818181818181No Hit
TGGCTACCGGGCACAACGTCGCCGCCTCGAGCCACCCGCACGTGCCGCCC11.8181818181818181No Hit
AGACAAAAACCGCAAATATCCAGTAAGATAGCTAAATCCCAAGAAATTCT11.8181818181818181No Hit
GGCTAACCGCAGACCAAAAGCAATCTCTCAGAAACAAAAAATACAAATAA11.8181818181818181No Hit
GTCGAGGATGTAGCGCTCGTGCAGTTCTTCATCGATGAAAAAGGTCTGGG11.8181818181818181No Hit
TCCGTCCAGTGACTGGCCCACCAGCTTCATAAGGGTCTGGTCCTCGAACT11.8181818181818181No Hit
ACGTTGGTGGTTGCTTCGATCTCGGCAATTGCAGAACGCTCCTCGTTGGT11.8181818181818181No Hit
ACCCTACATATAATTTATTTCAAAACGAGGAATCTATAACAAATATGACC11.8181818181818181No Hit
ATCCATCCAAAATATTAACCTTCTAAACGATCTAGCCAAGGACTAATTAT11.8181818181818181No Hit
AAAAAAGCCATAAACAAACCATTCAAATACAACGACATTACCTTACAACA11.8181818181818181No Hit
ACTTTATCAGCGCCTCGATTTCAGTCGTGGATGACTGTGTCCGCTGCGCC11.8181818181818181No Hit
GAGTGGAGCCCGTCCCAGTACCACGTCCAGGCGAAAATCACCTATATAAC11.8181818181818181No Hit
GTCATCACCTTGCCGCGCGGCACACCGTTCAAATCCGGGGTCACGCACTC11.8181818181818181No Hit
ACACAGGCCACTAAGCCAATAAAAAGAATGGCATACACTCAAACATACCA11.8181818181818181No Hit
GGGCGACCCGTTCATCAACGAATCCCACGTTGTGGCGTTCGGCTGGGGCA11.8181818181818181No Hit
AAACGATTGAGCCTGAGAAAATCACCTATCACGTGCATTACCCCTCACAC11.8181818181818181No Hit
GTATATATGAACAGGTGCTAGGCTCGCTCCGCTTTGTGCACGAAGCTAGA11.8181818181818181No Hit
AACAAACCTAGGTGAACAAATAACCTCCCATAGACAACCATCAAAGAAAG11.8181818181818181No Hit
GTCACACAATATGTTCGACGCCGCCATGATGCTGGGTATCTGCGACAAGA11.8181818181818181No Hit
CCTCAAAACCATACACTAAATTCACCAACAGAACAATAAACAAATAGACC11.8181818181818181No Hit
ACAAAACCCTCATTCATATAATCCTACTGTAGAACATAGACATCATATGT11.8181818181818181No Hit
CCTGCGCCCATTTGTACTACGTGCTGGCGTGGCGCCTTGTCGAGCCAGCG11.8181818181818181No Hit
TCACTGAGTTCTTCATCAACAGCGGGTTCAAGCGCGCCATGGCCGAGAAG11.8181818181818181No Hit
AAAAACAACGAACGAACAGCTGGGTCATACAACAGGCAACAATACGAACG11.8181818181818181No Hit
GCGTGACCTGATCATTAACCTTGTCTCCAAGGAAATAAAAATCCGTTACA11.8181818181818181No Hit
ACATTCCCCAACTTCAGTACTAAGACTGCAACATCACTTAAATACTCACT11.8181818181818181No Hit
GCTAATAGGATTCCGGATTGGCCTTTTAGTTGCACGACACCAGTGAACAG11.8181818181818181No Hit
GACCCAACACATATCACTTCCAAGTCTCCACACTACCCGAACAGCCAAAA11.8181818181818181No Hit
CCGCGAAGGTGATTGCCACAAAGGCTGTGGTACTGCCGCTGCTGACCTCG11.8181818181818181No Hit
AGTGCGGAGCGAGCAGGGGGAGGTGTTGGTCGAAGATCCGGGACGCGATA11.8181818181818181No Hit
CTTCCTGATATCCTCCACGACTAACTGGCGCCCAGCCCAATGATCCCGTG11.8181818181818181No Hit
TCATACACATTTCCACCATTGAGATGAAATAGTCAATAACTCCGTTGAAG11.8181818181818181No Hit
GGGTAGGTGGACATTGCGCACGTACGCTTGGGAAAAAAGTTGTAGATAAC11.8181818181818181No Hit
CAGCGTTGTAGGCGCCCGCACTGTGCCCCATCACGTACAGTCGATCGGGA11.8181818181818181No Hit
GTACCAGCCAACTCATCACAAGACGCATCAGCCATATCAAAACACTGCAA11.8181818181818181No Hit
CAGAAGACAACTTCAATCACAAAGTCACCCAACATTTACCACCATGAACA11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)