FastQCFastQC Report
Thu 22 Dec 2022
H7JYTBGXN_n01_YY266.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7JYTBGXN_n01_YY266.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAATAAAGAAACCAACCAAGCAGATCAAGCAAAAGCACATCAACAGGT11.8181818181818181No Hit
GCCCATGGCAGCAGCGTGGTGCAACATGCCACGCGTGAAATCAGTCAGCT11.8181818181818181No Hit
GGTGCGAAGTGGTAAACACTGCGATCTGATCGGTCAAGGCTGCAATGCCG11.8181818181818181No Hit
CGGGGGCAACTGGGCGATCAATGGCACCAGTTGATCCCGCGCAACCTTGG11.8181818181818181No Hit
GGGTAGCAACAATCGGGGAAAACGTAACTTTCGAATGAGGTTGCCGTTAT11.8181818181818181No Hit
CCTGCACGCTGCTGCTGAGTTGCTGGTCCTGATAAAAACGCAGGGTTTCG11.8181818181818181No Hit
GAGCTGTGGTCGGTCGCCACCACAGCCGCGTCCAATGGCTCGGTCAACGG11.8181818181818181No Hit
CTCCTGGAGCGTCCAGAGCATGCAGCCATGTCGGCGGCTTGGTTCTGGCA11.8181818181818181No Hit
TCAATATTCTTGCTCACAAATAATCCGCAACTGCTTGTAACGCATCTAGC11.8181818181818181No Hit
CGCCGTAACCGCACTCAACGCCGAGAGCAACGTCACCGGCACGAAGTGAT11.8181818181818181No Hit
CAATAGGCAATACAAAGTTCCAAAACAATGCACTCCCCCCAAAAAGGCAT11.8181818181818181No Hit
CATATAAGTGATGTAGCCGGCTTCGTACAGACGCTGGGCCATCACTGTCT11.8181818181818181No Hit
TTGCGTTCACGGTCTTCACGCAGACTGGCCTTGTAGACCAGACCCGACTT11.8181818181818181No Hit
GGCCAAAACCACTTTCGCCAGCGCGTGCAGTGGTTACGTCGTGATCGTGT11.8181818181818181No Hit
GTGGGCTGAAACCGACGAATCCCAGTCTGGCACCACAACTATTGTCATGG11.8181818181818181No Hit
CCTTAACGAAACCTTCAGACGGTCCTCGACGCAGCATAAAAGTAAATCTC11.8181818181818181No Hit
TGTTAAGTGGGAGTTCCTTAGCGGATGGCGGAGATCGCTATAATCCACGT11.8181818181818181No Hit
GCTCAAGGCCGAACACGGCCTGAAAATCGCCGTGATCGAAAACGAATTCA11.8181818181818181No Hit
GTCATCCCGTTGCTGGACGAACTGTCCGACGAAGCGCGCGGCATCGGTGC11.8181818181818181No Hit
GTGTCTCCAAAAAAAATCAATAATTTCATAAGCTTGGCTTCATAAAAAGG11.8181818181818181No Hit
AGTGATGCCAGTGGCATCACCTGGATCGGTGTTCGAAGTGATTCCAGTGG11.8181818181818181No Hit
ACCCACGAAGTCCCAACCTTAGGCCTCACACCACCATCCGACACACGAAA11.8181818181818181No Hit
TTATACAACACCATTTTCCACTCCAAAACCACCAACACGCTAATCACGAT11.8181818181818181No Hit
ATATAAAGTATGCGTGTGAGCGCTACACATTGTTCGCCTCTGGCTACTTA11.8181818181818181No Hit
ATCGAATGCATAAGAAACATTCCTTGGATTCATCAAACGCCAGGCTGCAG11.8181818181818181No Hit
GTTGTCACGCACCGCATACCTCTTGGACGGGTCATCTAGATAATGGACAC11.8181818181818181No Hit
CATCGCATCCCAGGTCTGGGATATGAATTTCGACAGCGATACCAACGTGA11.8181818181818181No Hit
GGCCCCAGAGAAAATACCTACGCCCACCAAAACAGTCACATACAATACAA11.8181818181818181No Hit
GTGTTTACCCTTCCAGTCGCAGGCGATCGAGAAGCAGCACCTGGGTCTAG11.8181818181818181No Hit
TTGTAGTCGGGGTCAATCGACTGGGTAACGAGTCGTCGAGTGCTTTCATA11.8181818181818181No Hit
GCTCTCACTGGCCCGAGTCGAGAACCGCTTCTACACCGCGATTCTGGTCA11.8181818181818181No Hit
GTTTTTCATCAGGGTGAGTCATCTGAAACCGGCAAACTGCATGTAAGAGT11.8181818181818181No Hit
TTATTTTACAAATAAAAAAAAAATGGATTTTTATAATAGTAATTATCTAT11.8181818181818181No Hit
GCTTAAACAGAGCGCGACCGGTCTGTCCGGCGGTCAGCAGCAGCGTCTGT11.8181818181818181No Hit
CGTCACGTACATAAGGCCACAAAAGCTTCAACTTGCCTTCAGTTACCTTC11.8181818181818181No Hit
TGTTGGTTTGATCGGCAATGTCGTCGATCAGGCTGACAATGTCGCCAATT11.8181818181818181No Hit
GACAAAAATATTACGGAATTTTAGACGTTATCGACCCGAGGAAAGCTAAG11.8181818181818181No Hit
TATGAAGAATATGCATCGAGTTGATTCCTGTTGTGTGCACCCGGGGGGAT11.8181818181818181No Hit
CAATCCGGGCCACAAGAAAAACTACGCCGCATTAGCCGGCGCATCAGAGG11.8181818181818181No Hit
TAATAAAAAACATCGACAATGCAGAAAAGCGAGCAATAAAAGCCTTATAA11.8181818181818181No Hit
GTTTTAGAAAGCATTGCACGACTATATTATGGTGCCACTTCCACCTCAAC11.8181818181818181No Hit
GTGTAGGGATTGACGAACGAGGCACCGGGAAGGTGCATGCCCATGACTTC11.8181818181818181No Hit
CTATGGGCCTTATCCACGCAACAAACTGGACATTTACATGCCACGGTCGA11.8181818181818181No Hit
GTGTGTAGATACAGTGAAGCATTTTTCCAGGTTTGGAAAAAAACGGTGTA11.8181818181818181No Hit
GAGGGCCAGCCCGCCGAGGTGCCGCTCAATGAGGCCGCCACAGTCGTCCT11.8181818181818181No Hit
TTCTTCCCCCAGCCATCGCGAGGCCAGTATTTGCCTGCGTTGTGAGCAAT11.8181818181818181No Hit
AGTTGAAGCGTCCTTGTCTGGCTGTTAATTTTTGTTGTTATGCCATATCG11.8181818181818181No Hit
CGTCGCACGTGAGCATCGACACTTGCGTCGAGCTGTCGCCGACCTTGCGG11.8181818181818181No Hit
GTCCATTTTCTTGCGGGTGTCCTTGTCCCAGAGGCGGCAGCCGTCCGGGC11.8181818181818181No Hit
AGCTGAGAGCCGAGTACGTCCACTTCCTTGCGCTCACCGAAGATCGACCA11.8181818181818181No Hit
CTTTTGCGTTGTGGGGGCTGGCGTTCAAACCCAACACCGACGATATGCGC11.8181818181818181No Hit
GTCTTCTACGTGCTGATCCGTAACTACGTTGGACGTCAAGAGGCCCGCAA11.8181818181818181No Hit
GGCTCAGCTTGTCCTGGCTCAGGTCTGGAAGCTCAACGAGTTTCTGGCGT11.8181818181818181No Hit
TATCGGGATCTACAACCTAGCCACGGCTAATTACACGCCTCTGATATTAA11.8181818181818181No Hit
GCATGTACACCTGCAGCGCTACATAAGGATCCGGGTGTTGGAGAAAATCA11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)