FastQCFastQC Report
Thu 12 Sep 2019
H7JYGBGXC_n01_dpErk_WE_514hpf_G1_4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7JYGBGXC_n01_dpErk_WE_514hpf_G1_4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21509474
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGACA43200.016.6296981
CTGGACG32900.015.7499771
GGGCTAC35250.015.5426521
GCCCGAA30150.015.5080261
AGCCACG44550.015.1379711
TGCGACG37850.015.1144511
AAACGCT37900.015.0945111
GAGACCC46150.015.089921
GAAGCCC47300.015.002151
AATGGAA48200.014.9731011
ATGGGAG32300.014.9185461
AAACCCA39400.014.8269981
AGGGAAG23150.014.8246623
GGGACCT29150.014.7568321
AACCTGA34900.014.6897841
AAACGAA37850.014.5331271
TGGAACT40550.014.4607661
GGGATCC41550.014.4304681
TCGAGAA38800.014.429838
TTGACCC38000.014.3889041
Produced by FastQC (version 0.11.5)