FastQCFastQC Report
Tue 13 Nov 2018
H7HWGAFXY_n02_WOX11_col_b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n02_WOX11_col_b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length76
%GC29

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTGATTTAATTCGATTGTTTTTATAAACAAAATTTAAGATATTTATTT13.571428571428571No Hit
CATGTTTGCCTCATTTTCTTTTATCAATGTAGATCGGAAGCGCGTCGTGG13.571428571428571No Hit
CATAAATCATTAATTTTTGATCTGTTAAACATAAATCTCACCTCATTTAG13.571428571428571No Hit
ATAGAAATCTCACAAAGGACATCAAACTAGTCGATCCCTTTTAATGTTTT13.571428571428571No Hit
CAAAACGTTTATTTTGGGCTTCTTTAGCAGAAGAGTCGGCCTCGAATGCA13.571428571428571No Hit
AAAAATAATTACACATTCTATCCATATTTTAGTGTAGTTTGTATTTTCTT13.571428571428571No Hit
AATGATCAGTGTTGTCGTATACTAGAGCAACTAAACCCAAAATTTGGCTC13.571428571428571No Hit
TACATAATCATCATACATACAGTCTTCTACTTAACATTCTCCTACATACT13.571428571428571No Hit
AAAGAATTAGTGAGAAACACTTTGGGCTATTTGAAAAAGCCCCAGCAGAC13.571428571428571No Hit
AAACAAAAGATCCTTCATTCTATAAGCACAAATCTACAGCAAAATTCATT13.571428571428571No Hit
GAAGATATAATTTGTTTATATATTATCTATATATAACAGATTGAATTCTA13.571428571428571No Hit
TTTAAGTGAAAGAGACTTTATTAAGAGACCCTAGTAGGACGTGCTCTTCG13.571428571428571No Hit
TAACTTAGATGATCAATATAATCCAAAATATTAAATTCGATTCTTCAAAT13.571428571428571No Hit
CTATAATATCCAATCTCAAAGAACTATCTGTTGTGATTAATTCTAAACAT13.571428571428571No Hit
ATAATTGGGCGTATGATAAGAACCGGAATCCTTCCTGATCACTCGACATA13.571428571428571No Hit
ATCTATTTTTGATATATTGAGCTACAAAATAAAGATATTAATACAAGATA13.571428571428571No Hit
GATTAATGAAAACATCCTTGGCAAATGCTATCGCAGTATTTCGTCTTTGA13.571428571428571No Hit
GGCGACCACTTTATCAATGCCAGCTCCCTTTGACTAGGTATGTGTTCTTA13.571428571428571No Hit
ATTTAAAACAATTTTTTTATAATAATGTTATTTTAAACAAAACAAAAAAC13.571428571428571No Hit
CTTTCATTCAAGAACCAAATTAAGTAAAGATTTACAATTGTTTTTAAAAA13.571428571428571No Hit
AAATCAAATAATTTAGATATAAGAACAAATAAAAATGAATGAAAATCATA13.571428571428571No Hit
ACTAGTGAGGTTAATAACTTTTTATCCCATGATTTAATCTTTGTTCCTGT13.571428571428571No Hit
ATTAGCCAGTTTCAAAATCATTAGTTGTTATTCCTCAAATATATAAGATA13.571428571428571No Hit
GGTCAGGACGTCAAACTTTTCCGCCTCCCCAAGTTGGCATCCCCACGGGC13.571428571428571No Hit
CATATGTATGTGTGTGCACGGAAAATCACAAAATATGTGTCAGCGTCTGT13.571428571428571No Hit
GAATTTAGGGAACACAAGTAAACAAAATATAGACATGATCAAATCAATTA13.571428571428571No Hit
TTATGCGCTTTTATATTTACATTACAAGAAATTAAAGATAAAGAAAAATT13.571428571428571No Hit
ACACTTCGTGATTCCGACGTGGGGCAGCATGCAGCACATCCCTAGAGGAA13.571428571428571No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)