FastQCFastQC Report
Tue 4 Dec 2018
H7HWGAFXY_n02_WOX11_c24_b-b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n02_WOX11_c24_b-b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3202405
Sequences flagged as poor quality0
Sequence length76
%GC30

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGGG3303.4282493E-813.78603370
AGAGCGG3551.900569E-49.85783570
GTGAGGG2850.00342446969.82401461
CGGAAGC5057.9552956E-79.70167270
GTGGCAG3200.0088834458.74951243
GTAGGGA30850.08.39433970
TGTAGGG38850.08.01694569
TCGTGTT19350.07.595882470
AGAGTGT21400.07.522357569
GTCGTGG19550.07.160166770
GTGTAGG44600.07.140368
CGTGTAG49650.06.484529570
AAGAGTG26800.06.267817568
GTCGTGT79550.06.15882470
CGTCGTG101500.06.10263169
TAGGGAA32250.06.07670670
GTGTAGA15901.720764E-95.942600769
TCGTGTA66000.05.93859969
TGGAGGG10103.2405937E-55.890116765
AGGGAAA41150.05.78294469
Produced by FastQC (version 0.11.5)