FastQCFastQC Report
Tue 13 Nov 2018
H7HWGAFXY_n01_pIXHALO_col_b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n01_pIXHALO_col_b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTAATATCATCACCAACCTCATCATCTTGAGTTCATTTTTTATGATCTA17.6923076923076925No Hit
TCCAACGACTGTTAATTTCGGTAAATTGGCTTCGATTACGTCACCGTCTG17.6923076923076925No Hit
GCCGTCGCTTTGTCGTGTTTCACGTTTATATTGAACGTGGCCCCTAATAT17.6923076923076925No Hit
CGCTATGTCATCCTTTTAATATAGCTATCATCCCTCTAATTTACTTTCCA17.6923076923076925No Hit
CAGCTTGATCACAGAATTATTAGTTAAATAGCTTCACTGAATATATGTTG17.6923076923076925No Hit
TGATGTCATGTGTATGATTGAGTATTAGAACTTCCACCGCAACCTGATCT17.6923076923076925No Hit
ATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGC17.6923076923076925No Hit
ACCACCACAAACCAAAAAGCAAGTGGGCAAACCGAGAATGATGTCATGCT17.6923076923076925No Hit
GCGTGTCATGCGTGGGCTGACATGGATTCTTCGAGGCCTAGGGGTGGCGG17.6923076923076925No Hit
GTCATGTGTATGATTGAGTATACGAACTTAAACCGCATACTGATCTTATA17.6923076923076925No Hit
CGAAAATGACTTCATGTCATGAGAATGATTGAGTATAAGAACTTACTCCC17.6923076923076925No Hit
ACAACATCAGCATAGTCGAACCGTGAAGTGATTACATTAGCAGCAACCAA17.6923076923076925No Hit
CAAAAGGAAACAATATGTTTACTGAGACAAGATTACTACTATGTAGAGAA17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)