FastQCFastQC Report
Tue 4 Dec 2018
H7HWGAFXY_n01_coldna_daplib_dapv1-b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n01_coldna_daplib_dapv1-b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1413519
Sequences flagged as poor quality0
Sequence length76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGGC851.309264E-424.70578248
CCAGTCC5050.022.17812770
CTGAACG2301.2732926E-1121.30426270
TCACAGG3450.020.28977470
AACTCCC4950.019.797970
GCCGCTC900.005276497519.4450555
TTGCCGG1301.05788786E-418.84607747
CACACGG4550.018.46146470
CCGGGGT1401.8661175E-417.4999350
TAGGGGG1200.001341311517.4999370
AAGCGCT1000.00969166917.4999289
GCCGGGG1503.1598783E-416.33326749
GCGGGGT1300.00229120916.15378250
GAGCACC15450.015.40446870
GGTGGGG3051.2119926E-814.91797354
AATCGGG3303.4171535E-813.78782370
AGTCACC4607.2759576E-1213.69559770
TGCCGGG1600.00909766413.12494748
GGGGGTG2559.816811E-512.35289157
CGGGGGG2000.002782042412.24994951
Produced by FastQC (version 0.11.5)