FastQCFastQC Report
Tue 13 Nov 2018
H7HWGAFXY_n01_c24dna_daplib_dapv1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n01_c24dna_daplib_dapv1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTATGATTGAGTATAAGACCTTAAACCGCAACCGCATCGTATAAGCCTA14.3478260869565215No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTACGATGGCGGGTGT14.3478260869565215TruSeq Adapter, Index 22 (97% over 39bp)
ACTTACACCGCCACCCGATCTTAAAAGCCTAAGTAGTGTCCTTGTTAGAA14.3478260869565215No Hit
AGGCGGAAGAGCACGGGAGCGTCGTGCTGAACCACCTGCTGGGGTTGCGA14.3478260869565215No Hit
TTGTCCCTGATCTTCCGGATTAGTTGAACATATTCTGCCTTCTGCAACGA14.3478260869565215No Hit
TGGACCAAAAGGGTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATAC14.3478260869565215No Hit
CTTTGAGAGATGTTTGTATGGTTTCGAAACTGGATCCCAAGAATCCCATG14.3478260869565215No Hit
TCTGGGGATACCCCAGGTCTGCAGTGAGTAGAAATACGAAGGTTGCGTAG14.3478260869565215No Hit
TAGGCTTTTAGGATAAGAATGTGGTTTAACTTCTTATACTCAATCATACA14.3478260869565215No Hit
TCCCCCTAGTACGCTATGACATGATACTGTTAGTGTGGATATTGTTAACG14.3478260869565215No Hit
AATTAAGTTGATTTCAATTTTGTATTTTTATTAGCTTTTGTGTACCAAAG14.3478260869565215No Hit
CAAGGACTGTAAAACAAAGAATTAACCTATGTATGAATCTTAAATTATTA14.3478260869565215No Hit
TTGACCGCCACAACACATTCCTCATCCTGAGGAGAAGTTCAGGACAATGA14.3478260869565215No Hit
GCCCAACGGCGTCACAATGCCCAAAAAAACGATGAAAGACAAGGCGATAC14.3478260869565215No Hit
AAGCAGAAGCTTGGTTAGTGTTTTGGAGTCGAATATGACTTGAACTCATG14.3478260869565215No Hit
GTTTGCACATGTACCTTGGACTGTCTTGATATTTCATCTACGTCGAACGC14.3478260869565215No Hit
GTTAGTATTTTGGAGTCTAATATGACTTGATGTCATGTGAATAGATCGGA14.3478260869565215No Hit
AGTGTGTCCTTATTAGAAGAACCAAATCAATATACTCAAATGGAAATAGG14.3478260869565215No Hit
GGGGGGGGGGGGGGTGGGGGAGTGGGGGGCGTGTGAGGTGCTGGTAGTGG14.3478260869565215No Hit
TGATTCCTAGTTATAACTATAAAAAACAATGTACGTTATAGGCATAGCAG14.3478260869565215No Hit
CAAGATTTGAGAAGCAAGAAGAAGCTTGATTAGTGTTTTGGAGTCGATTA14.3478260869565215No Hit
TCAGTGGGCATTTACCTGATATTTCATCAAGATTTGATTACACTACTCCA14.3478260869565215No Hit
GAGGATGAGGCACCCGCACCCGCTCAGTGAGGCGGCAGCCAAGCCGCCCA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)