FastQCFastQC Report
Tue 4 Dec 2018
H7HWGAFXY_n01_WOX11_col_b-b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HWGAFXY_n01_WOX11_col_b-b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1722822
Sequences flagged as poor quality0
Sequence length76
%GC28

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAGCCG800.002667816821.8748132
TCGACGT1452.4403712E-416.89640451
CCCATGC1600.00909900413.12488631
GAGCACC2356.84994E-411.91478970
ACTCCAG19850.09.69764969
CTCCAGT18700.09.17104370
CAGTCAC13700.08.94152768
GTCACAT14200.08.38020870
AGTCACA14750.08.30501369
CCAGTCA14550.08.17862267
CATCACG5151.0205305E-48.15526969
GAACTCC23200.07.84475967
CACGATC4100.00760448077.682860467
TCCAGTC16450.07.44674470
TCACATC13700.07.408694370
AACTCCA28500.07.12274568
TCTGAAC32950.07.01056170
TGAACTC28350.06.41969766
CGTCTGA36250.06.372358368
GTCTGAA36050.06.21353869
Produced by FastQC (version 0.11.5)