FastQCFastQC Report
Tue 18 Dec 2018
H7HVFAFXY_n02_Gbc.c78.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HVFAFXY_n02_Gbc.c78.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCAATAGCAGTTCCGCCATTACGCAGCCAGAGGACCATATGTCGATTT110.0No Hit
GATTCATACGAACTTGTGGAAAATACATGCAACAAAGTACTCAGCAAAGT110.0No Hit
TCTGGATGCTGTCCAGGGGCTAATACCCAATAAGGCGGCTAGTAAATGGA110.0No Hit
GACGTAAAGGAGGGCCACGAGGCAGGATTTGTTAGTATGAGTAGAATCTT110.0No Hit
ATTGTGTACCATGGCCGCATCCTTTTTAGGAACCTCTAATTTGTTTAAAC110.0No Hit
AGAGGAAGATGTTCTGAATGAGAGAATTCAAGGATTCCTGTCTAAAAAAG110.0No Hit
CGTCTTCCACTTGCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCA110.0No Hit
GTTGTATAGTGGCAAATCCTAGAAGGCATAATTACTTTTGAAGGTTCTCG110.0No Hit
GATAAGCAACATGCTGGTTCGCTAAGCTCTGCTGTGTTGGTTCCATTCTT110.0No Hit
GCAGTTTATTGGTTAGTTTCAGGTCTTTTTACGTAAGGAAGAATGCAATT110.0No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)