FastQCFastQC Report
Tue 18 Dec 2018
H7HVFAFXY_n01_Gbc.c72.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7HVFAFXY_n01_Gbc.c72.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGACAATGGGTATTATGACCCAGATTTGTTACGCAAACAGTCAAGAGCA18.333333333333332No Hit
GGCCTAAACTACGTGAAGAAAAGCACTTCCAAGATTTTTATCCTGATCTT18.333333333333332No Hit
GTGCTCCGTATGGAGTTTCTTGTCAGATTAGAAAACGATGAAGTTGATCG18.333333333333332No Hit
CCTTTTGCCATTTCTAATCAAGAGGTGTTAACCGCTACAATTAGCGAAAA18.333333333333332No Hit
CTCACGGTTGTGGTGTGATCTTAATTGGATTAGCCTCCTTTGCCGCGTCT18.333333333333332No Hit
AAATGGCACAGATTGTATGTTTTACCATTATCGTTCGAAAGAAAACTCAT18.333333333333332No Hit
GTAAAGCTAAATTCATCCTCTATTTCATCTCCTGCTTGATCATTCCTCTG18.333333333333332No Hit
AATTTTAATAGCCTTGAAACAGAAGTCACTAAACAGATTAACGGCATCTT18.333333333333332No Hit
AGTAAAACAGTGCCGAATTTGCATCGAAAAGAAGATATTTCTTCTTTGAT18.333333333333332No Hit
GGATTTGCATTCTTGTTTTTTCGAAGTTGTTTACAATAGTCGCATGTAGT18.333333333333332No Hit
GACGGATCCTTCCATGCCCATCTCGATGAGCTTGTTCAGCTCGAGGGCGT18.333333333333332No Hit
CGCACGGACAGCAACCCATGACATCAAGAGATGACTATTACGACAATAAA18.333333333333332No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)