FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_G2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_G2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATTGGGATCTTGCACCTGATATTGTGGATTACTGATCGTCTTTTTTTC14.3478260869565215No Hit
ATTTGAGATTACAGGAACTATGCGCAAGCTTGCCGACCAAAGTCTCCCAC14.3478260869565215No Hit
CCGCAGCACCTGCGGCACCAGACCTTCTGGGAAGTGTTGAACCTTGCATT14.3478260869565215No Hit
AAGCAGTAGTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCC14.3478260869565215No Hit
GGATAATCAGGAACTGGGAAATTGTGAAAATTCAATGGTCACAAGATCCC14.3478260869565215No Hit
GAACTCAAACTCAGTGATTATGATGGACGACTAATCCAGAATAGCATAAC14.3478260869565215No Hit
TGCGATAACACGTGCATGGAAAGTGTCAAAAATGGGACTTATGACTACCC14.3478260869565215No Hit
GTATGACAGTGATGAGCCAGAGCCCAGATCTCTAGCAAGCTGGGTCCAAA14.3478260869565215No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA14.3478260869565215No Hit
ATATATTGTTTCTCCAACTCTTGATAGTGTCTGTTATTATGCCGTTGTAC14.3478260869565215No Hit
GCCCAGAAGAAACGCAGGAAGAAGAGCTCCAAGTCCCTGGCTCAGGCTGG14.3478260869565215No Hit
GTGTATGGGCTTGCAGTAGCAAGTGGGCATGACTTTGAAAGGGAAGGGTA14.3478260869565215No Hit
ACCTTCTCTTCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGGG14.3478260869565215No Hit
TATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGCAGA14.3478260869565215No Hit
AACTAGGCACGTTCAGCGTGAACACAAATCCTAAAATACCCTTAGTCAGA14.3478260869565215No Hit
TCCCAGCACTGGGATGCTCTTCTAGGTATTTATTTCTTCTCTCATCAAAA14.3478260869565215No Hit
GGATAAGTTCTCTCATCCACTTTCTGTCTACTCTTCTATATATGGGTCCT14.3478260869565215No Hit
GATCTGGCCTGCGGATGCCTTTTGTTGATTGGTATTTCCTCCACTCCTGG14.3478260869565215No Hit
TTTTAAGGTTGTTTGGCTATTCAGGCTCTTTTGTGGTTCCTGTCTCTTAT14.3478260869565215No Hit
GTAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGT14.3478260869565215No Hit
GTTTTCGGCTGAATCTAGAAAATTGCTTCTCATTGTTCAGGCACTTAGGG14.3478260869565215No Hit
AGGCCATGGTGTCTAGGGCCCGGATTGATGCCAGGGTCGACTTCGAGTCT14.3478260869565215No Hit
GAAATAAGGTGGTTAATTGAAGAAATGCGGCACAGATTGAAAGCGACAGA14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)