FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTTATTCTCCTCCTCCTTCTTCTGCTTCTCTTCTTTTTTTCTTCTTCT15.88235294117647No Hit
GGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTGGATCGAGTGAAC15.88235294117647No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG15.88235294117647No Hit
TTACTATAGAAGAAGCTCAAACGAGAAATACCGGTCCAGGGGGCCCAGGA15.88235294117647No Hit
TCCTTAAAAGGAAGAGGCAACACCCTTGGCCTCGATATCGAAACAGCCAC15.88235294117647No Hit
ATTCAAGTGCTCCGATGTTGAACCCAAATGGATTTTTGTGATCCTTATAT15.88235294117647No Hit
GGTCTAGTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTC15.88235294117647No Hit
ATCTCAGGCTCCACGCTCAATAGGGGATTTGCTTGAAGATTCTCTCCCTC15.88235294117647No Hit
CACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCCGCAAGC15.88235294117647No Hit
GACTCATCCTAGCTACAGTGCTGGTCTGAAAGATGACCTTCTTGAAAATT15.88235294117647No Hit
CGCTCCCAGGACTCCAGGATCATGACCTGAGCCAAACCCAGTAGCTCAAC15.88235294117647No Hit
CAAAAATGCAGTTGGGGTCCTCATCGGTGGACTTGAATGGAATGGTAACA15.88235294117647No Hit
GCATGATCCAGTCTCGTGACATTTCCTCGAGGGTCATGTAAGAAAGGTAG15.88235294117647No Hit
CCCAAGTCACCTGTTTCTAAATATTTGTTACAGTCATGGGCCTGTCTCTT15.88235294117647No Hit
GGCTTTAACCCACTGAGCCCCCCAGGTGTCCCACTAGTAACTATTATTGT15.88235294117647No Hit
CTGGTGCACTTGCCAGTTGCATGGGCCTCATATACAACAGGATGGGAACA15.88235294117647No Hit
GTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)