FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCATCCTGTT14.761904761904762No Hit
AGTAGAAACAAGGGTGTTTTTTATCATTAAATAGGCTGAAACGAGAAAGC14.761904761904762No Hit
ACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGC14.761904761904762No Hit
GTTTTCTTGGCGCCAAACTCTCCTTATTTCTCCTTTGTCATAAAGGATGA14.761904761904762No Hit
GGGCTGGGCAGCGAGACTTGCACCGGAGCCTTTGCCACAGTCCAGGTCAG14.761904761904762No Hit
GTCTCGCTGGATTCCTCTTTCAAGATCCATTCCACGATTTGTTTCCCAAC14.761904761904762No Hit
GTACAGGAAAGACCCAGGCCTGGGGGGGGAGGGGTAGTGTAAAGGGCTCA14.761904761904762No Hit
CATTAGAGCACATCCAGAAACTGAGTGCCCCCAGGGAGCCTACCAGTACC14.761904761904762No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA14.761904761904762No Hit
GAAAGAGAATTGGTCCGTAAAACAAGGTTTCTCCCAGTAGCCGGCGGAAC14.761904761904762No Hit
CTTGACCACTCACGTTGGGTCTTATTGATAGTTCCGGCTTGAACTTCTTG14.761904761904762No Hit
CCATCTTCTTGGTCATGTTGTCTCTTACTCTCCTTTTTCTTCTGTCTCTT14.761904761904762No Hit
GTCAGATAAATGAAATCTTAAGAATGCCACAGATGGGCTTCTAGTGGCCT14.761904761904762No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGT14.761904761904762No Hit
TTTCGTCTCTGTTGAAGTTTGCTTCCTCTGAGGATGTTGGGTAGTCATAA14.761904761904762No Hit
CTGCAATGACGAGAGGATCACTTGAATCGCTGCATCTGCACTCCCATTCG14.761904761904762No Hit
CTCCAATTAGCTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCTTCTTTC14.761904761904762No Hit
ACCACCCTTCTGTCCTTGGACCCTGTTGGGGCTCTGGTCCTCGGTTATCT14.761904761904762No Hit
GTCTTACTCATATCATGATTTGGCATTCCAGCCTGAATGCTGGGGCATAT14.761904761904762No Hit
CAATATGGATTAGCCACTCAATTCAACTTGGGAATCAAAATCAGATTGAA14.761904761904762No Hit
CCGGAGCCTTTGCCACAGTCCAGGTCAGAAAGGGCCAGTGCCAGGGAGAA14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)