FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGCTAGAGTCCCGGGTTCGTTGGGTTTGCGCCGCTACGTCCCCGGGG13.4482758620689653No Hit
GTAATCCACAATATCAGGTGCAAGATCCAAATGATATATGCTGCAATGAC13.4482758620689653No Hit
ACTCAGCAACGTCTGGCAAAGACCAACCCACACTCTCACTGTTTAAACCA13.4482758620689653No Hit
CCCAATTACCTCATGGCTTGGAAGCAGGTGCTAGCAGAGCTACAGGACAT13.4482758620689653No Hit
ATATACAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTGTC13.4482758620689653No Hit
AATCAGCAATCTGTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCT13.4482758620689653No Hit
CCTTATTCTTCATCCTCCCTGAATTTCACGACGTCCATTTCTCCAGCACA13.4482758620689653No Hit
GTGAATGCCCCATAGCACGAGGACTTCTTTCCCTTTATCATTAATGTAGG13.4482758620689653No Hit
GGTACAGATTGCTTCAAATGAGAATGTGGAAACCATGGACTCCAATACAC13.4482758620689653No Hit
CAGGAAATCTATGCTAGAAGCTCAAAACAGAAATAACGATCCATGGGGCC13.4482758620689653No Hit
GAACTCAAACTCAGTGATTTTGAGGGACGACTAGTCCAGAATTGCATTAC13.4482758620689653No Hit
GGCATCCGCAGGCCAGATCAGTGTGCAGCCTACATTCTCAGTGCAGCGGA13.4482758620689653No Hit
CTGTAAATTGTGATTACCAAGTAACCATTAAGAAGTTAACTAAAAAGTAT13.4482758620689653No Hit
TTCTTGTATAGTTTAACTGCTCTATCCATGTTGTTCGGGTCCCCATTCCC13.4482758620689653No Hit
CGACAGAGAATAGTTTCGAACAAATAACATTTATGCAAGCCTTACAACTA13.4482758620689653No Hit
GTGCTAGCCAGCACCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGT13.4482758620689653No Hit
GCCTGTTCACTCGATCCAGCCATCTGTTCCATAGCCTTTGCCGTAGTGCT13.4482758620689653No Hit
GATTAACTCCATTGCTATTGTTCCAACTCCTTTCACCGCAGCACCTGCGG13.4482758620689653No Hit
GGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGA13.4482758620689653No Hit
CTTGTCACCTCTGACTAAGGGAATTTTAGGATTTGTGTTCACGCCTGTCT13.4482758620689653No Hit
GAGCCACCCAGGCATCCCTGAATCAGCATTTTAAATAAAGATCTCAATGG13.4482758620689653No Hit
GCCAGATTAGAACAAATGAAAACCCCGCTCAAAAGAGTAAATTGGAGTGG13.4482758620689653No Hit
CGGTAGACACAGTACTAGAAAAGAATGTAACAGTAACACACTCTGTTAGC13.4482758620689653No Hit
CTCCTGGTCCTTATGGCCCAGTATCTGCTTCTCAGTTCCAGGGTATTGGA13.4482758620689653No Hit
ATGCTATACAACAAAATGGAATTTGAACCATTTCAGTCTCTTGTCCCTAA13.4482758620689653No Hit
CTTGAACAGTGAGCTTGAAAAAAAAAAAGTCCAGGGTTTTTTTTAAAATG13.4482758620689653No Hit
ATTTATTTGACAGAGAGAGATCACAAGTAGGCAGAGAAGCAGGGGGCGGG13.4482758620689653No Hit
GGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAATGGTGCTGG13.4482758620689653No Hit
ACACCCAAGGGGGCTATAAACCCCAGCCTCCCAGTTCAGCATATACATCC13.4482758620689653No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)