FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F5.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F5.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACAGATGGCTCCTACCCCCAATCCACTTATCAGGCATGCAACCAGCATG14.0No Hit
TGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGCCCAGGCG14.0No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAACCTATTCTCTGTCGCT14.0No Hit
CACCAGAACAGAGTAGGATGCAATTTTCCTCATTGACTGTGAATGTGAGA14.0No Hit
CCATAGAAGTGGTTAGCGCGATTGGCGGCACCGCGCATGCGGCTGGACGG14.0No Hit
TTGCAGGAAAGAACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACA14.0No Hit
GTCTAATGTCGCAGTAACGAACTAGCGATATACTCACTAAGACCTGTCTC14.0No Hit
GTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAGCCATCTGTCTGTGAG14.0No Hit
ACCCTTCCCTTTCAAATTCATGCCAAATTGATACTGAAATCCCTGTATCT14.0No Hit
TCATTAGGGCGTGGATTGTCTCCGAAAATCCCACTGCATATGTATCCTAT14.0No Hit
GTCTGATTAGCAACCTCCATGGCCTCCGCTGCCTGTTCACTCGATCCAGC14.0No Hit
AAACTATACAAGAAGATCAAAAGAGAAATAACGTTCGATGGGGACAAGGA14.0No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC14.0No Hit
CTATGGAACAGATGGCTGGATCGAGTGAACAGGCAGCGGAGGCCATGGAG14.0No Hit
AACTAATGCTTTTAGTTCTCCCTATCCAAACACCATTGCCGTATTTGAAT14.0No Hit
CAAAAACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTT14.0No Hit
TGCACAAACAGACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCC14.0No Hit
GCAAAAGCAGGGTAGATAATCACTCAATGAGTGACATCGAAGCCATGGCG14.0No Hit
AGAAAGAAGAGCTCCAGGATTGTAAAATTGCTCCCTTGATGGTGGCGTAC14.0No Hit
TCACTAAGCTATTCAACTGGTGCACTTGCCAGTTGCATGGGCCTCATATA14.0No Hit
ACACTATTCTATGTCGCTTTCGATCAGTGCCGCAGTTCTTCAATGACCCA14.0No Hit
CTCTCAAAATATACAGAGATTCGCGTGGAGAAACTGTGAGGAGAATGGGA14.0No Hit
AGACTGGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCCCTCTTTGCG14.0No Hit
GAGTTGGAACAATAGCAATGGAGTTAATCAGAATGATCAAACGTGGAATC14.0No Hit
GCCTCTTCCTTAAAAGGACTTTTGATATCGGAGGAGCCGAACAAGGAATG14.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)