FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA29.523809523809524No Hit
AATGTGCACTGAACTCAAACTCAGTGATTATGAGGGACGACTAATCCAGA14.761904761904762No Hit
CATTGATTCCATTACATCCTTTAAGAAATCTATTAGCCCTGTCTCTTATA14.761904761904762No Hit
CTCTGGAATCATGTCCATTTTTCTGTTGTCTGCGGTTATTGGGTATCTCA14.761904761904762No Hit
GCTTTGGCCAGACGGTGGACACATCATCTCTGTTTCAGGTTCCCCAGAAA14.761904761904762No Hit
CCTCCCTCTCTCTGCACGCTCCACCTCTATTAATGAATCTGGGCTCCTAC14.761904761904762No Hit
ATCTTTAACCGATAAGAGACCTGGATACTACTAAGGGCTTACAATGAGGA14.761904761904762No Hit
GTGCACATTTGGATGTAGAATCTCCCGATTCCAGCAATCATTCTTCCCAC14.761904761904762No Hit
ATCCTGACCACTCATTTATTACTACGATATCTTGATTTATTGAGAAGTTA14.761904761904762No Hit
AAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAGCTTTC14.761904761904762No Hit
GACGAGATTACGAACAAAGTAAATTCTGTTATTGAAAAGAAGAATACACA14.761904761904762No Hit
TAATCAGACTAGGCAGATGGTACATGCAATGAGAACTATTGGGACTCATC14.761904761904762No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC14.761904761904762No Hit
CTTCGGCCCTGTCCACTTCAGAAATCAAGTTAAAATAAGGAGGAGAGTTG14.761904761904762No Hit
TTCTGATAGAGACTTTGTTGGTCTGCACTATTAGGTGGTCTGTCTCTTAT14.761904761904762No Hit
AGGTTCCACACTTCCCAGATGGGCGGGTGCCGCAGGTGCTGCGGGGAAAG14.761904761904762No Hit
CTACTAAGGGCTTTCACTGAGGAGGGAGAAATAGTTGGAGATATTTCAGA14.761904761904762No Hit
GTCATAGAGGGAGGCAAAGGAGAGGAGAGGAAGCATTCCCCACAAGGGTC14.761904761904762No Hit
TCCTAAAATTCCCTTAGTCAGAGGTGACAAGATTGGTCTTGTCTTTAGCC14.761904761904762No Hit
CTTCATTACTCATGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCG14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)