FastQCFastQC Report
Mon 11 Dec 2023
H7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH7GWJBGXV_n02_CIVIR_Ferret_Flu_R1_F2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTGTGGAACGCTTTCGTGTTGGAATCTCTTTCTTTCCTCTTATGAAA14.761904761904762No Hit
CTCTAATGCAAGGTTCAACACTTCCCAGATGGTCTGGTGCCGCAGGTGCT14.761904761904762No Hit
GAATGTAGGCTGCACACTGATCTGGCCTGCGGATGACTTTTGTTGATTGG14.761904761904762No Hit
CCATTCTGTTTTCATGCCTGATTAGTGGATTGGTGGTAGTAGCCATCTGT14.761904761904762No Hit
TTTATAATCAGTTCTCCATCTCAATATTGCAGATTTTAAAAACACCAGAT14.761904761904762No Hit
GAAGTGAATTGTTCGCTCTCTTGCGTGCAGTAACTATGCTTGATTCACCT14.761904761904762No Hit
CCGGTGCACTGAGAAGGTAGGCTGCACGCTGATCTGGCCGGCGGCTGCCT14.761904761904762No Hit
GATATCCTGACCACTCATTTATTCCTACGATATCTTGCTTTATTGAGAAG14.761904761904762No Hit
ATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATC14.761904761904762No Hit
ATATTGTGGATTACTGATCGTCTTTTTTTCAAATGTATTTATCGTCGCTT14.761904761904762No Hit
GTGTGCTCTTCAGGGCGGCTGCAGATCCTGACCCCGGCTCATTTTGAGGG14.761904761904762No Hit
AAGCAGGGGAAAACAAAAGCAACAAAAATGAAGGCAATACTAGTAGTTCT14.761904761904762No Hit
TCCTCTCTCTGCCCTGTTAGTGGATGGGCTATATAAAGTAAAGACAAAAG14.761904761904762No Hit
GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATT14.761904761904762No Hit
ACCTAGAAGAGCATCCCAGTGCTGGGAAGGACCCTAAGAAAACAGGAGGA14.761904761904762No Hit
GAATGGTTCTTGAATGCGGAATCCAGCGCGACACTTCGAATGACAATTGC14.761904761904762No Hit
TCCCCAGCCTTGAAAACTTTAGAGCCTATGTAGATGGATTCGAGCCGAAC14.761904761904762No Hit
GCACTGAAGTAGTTGTGGCAATGCTACTATTTGCTATCCATACCTGTCTC14.761904761904762No Hit
GGGTTGGTCTTGGCCAGACGGTGCTGAGTTGCCATTTACCATTGACAAGT14.761904761904762No Hit
GAACTATTGGGACTCATCCTAGCTCCAGTGCTGGTCTGAAAGATGACCTT14.761904761904762No Hit
GTTGAATAGCTTAGTGACACCTCCTTGGCCCCATGGAACGTTATTTCTCT14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)